Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
NCDNQ9UBB6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
NCDNQ9UBB6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
NCDNQ9UBB6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NCDNQ9UBB6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.11■□□□□ 0.81
NCDNQ9UBB6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
NCDNQ9UBB6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.11■□□□□ 0.81
NCDNQ9UBB6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NCDNQ9UBB6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.11■□□□□ 0.81
NCDNQ9UBB6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NCDNQ9UBB6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NCDNQ9UBB6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.11■□□□□ 0.81
NCDNQ9UBB6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.11■□□□□ 0.81
NCDNQ9UBB6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.11■□□□□ 0.81
NCDNQ9UBB6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NCDNQ9UBB6 KRT18P56-201ENST00000507275 550 ntBASIC20.11■□□□□ 0.81
NCDNQ9UBB6 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.11■□□□□ 0.81
NCDNQ9UBB6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.11■□□□□ 0.81
NCDNQ9UBB6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
NCDNQ9UBB6 FITM1-202ENST00000559294 800 ntBASIC20.11■□□□□ 0.81
NCDNQ9UBB6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.11■□□□□ 0.81
NCDNQ9UBB6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.11■□□□□ 0.81
NCDNQ9UBB6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
NCDNQ9UBB6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NCDNQ9UBB6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NCDNQ9UBB6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NCDNQ9UBB6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NCDNQ9UBB6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCDNQ9UBB6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.1■□□□□ 0.81
NCDNQ9UBB6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCDNQ9UBB6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NCDNQ9UBB6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCDNQ9UBB6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCDNQ9UBB6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCDNQ9UBB6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NCDNQ9UBB6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.1■□□□□ 0.81
NCDNQ9UBB6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCDNQ9UBB6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCDNQ9UBB6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCDNQ9UBB6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCDNQ9UBB6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCDNQ9UBB6 LINC01238-205ENST00000567549 1107 ntBASIC20.1■□□□□ 0.81
NCDNQ9UBB6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
NCDNQ9UBB6 AL358472.4-201ENST00000633140 710 ntBASIC20.1■□□□□ 0.81
NCDNQ9UBB6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.1■□□□□ 0.81
NCDNQ9UBB6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCDNQ9UBB6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NCDNQ9UBB6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.1■□□□□ 0.81
NCDNQ9UBB6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCDNQ9UBB6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCDNQ9UBB6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NCDNQ9UBB6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
NCDNQ9UBB6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NCDNQ9UBB6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
NCDNQ9UBB6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NCDNQ9UBB6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.09■□□□□ 0.81
NCDNQ9UBB6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NCDNQ9UBB6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NCDNQ9UBB6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
NCDNQ9UBB6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.09■□□□□ 0.81
NCDNQ9UBB6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NCDNQ9UBB6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.09■□□□□ 0.81
NCDNQ9UBB6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
NCDNQ9UBB6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.09■□□□□ 0.81
NCDNQ9UBB6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.09■□□□□ 0.81
NCDNQ9UBB6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
NCDNQ9UBB6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.09■□□□□ 0.81
NCDNQ9UBB6 EP400NL-214ENST00000641289 2402 ntBASIC20.09■□□□□ 0.81
NCDNQ9UBB6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
NCDNQ9UBB6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NCDNQ9UBB6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NCDNQ9UBB6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NCDNQ9UBB6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NCDNQ9UBB6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
NCDNQ9UBB6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NCDNQ9UBB6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NCDNQ9UBB6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NCDNQ9UBB6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.08■□□□□ 0.81
NCDNQ9UBB6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NCDNQ9UBB6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
NCDNQ9UBB6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
NCDNQ9UBB6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NCDNQ9UBB6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NCDNQ9UBB6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NCDNQ9UBB6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.08■□□□□ 0.81
NCDNQ9UBB6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.08■□□□□ 0.81
NCDNQ9UBB6 AC004264.1-201ENST00000608354 794 ntBASIC20.08■□□□□ 0.81
NCDNQ9UBB6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
NCDNQ9UBB6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NCDNQ9UBB6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCDNQ9UBB6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NCDNQ9UBB6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.07■□□□□ 0.8
NCDNQ9UBB6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NCDNQ9UBB6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCDNQ9UBB6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
NCDNQ9UBB6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NCDNQ9UBB6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCDNQ9UBB6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCDNQ9UBB6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
NCDNQ9UBB6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms