Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CXXC1Q9P0U4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CXXC1Q9P0U4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CXXC1Q9P0U4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CXXC1Q9P0U4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.84■■□□□ 1.09
CXXC1Q9P0U4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.84■■□□□ 1.09
CXXC1Q9P0U4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CXXC1Q9P0U4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.84■■□□□ 1.09
CXXC1Q9P0U4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CXXC1Q9P0U4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CXXC1Q9P0U4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CXXC1Q9P0U4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CXXC1Q9P0U4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CXXC1Q9P0U4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
CXXC1Q9P0U4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.83■■□□□ 1.09
CXXC1Q9P0U4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.83■■□□□ 1.09
CXXC1Q9P0U4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CXXC1Q9P0U4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CXXC1Q9P0U4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CXXC1Q9P0U4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CXXC1Q9P0U4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.83■■□□□ 1.09
CXXC1Q9P0U4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.83■■□□□ 1.09
CXXC1Q9P0U4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
CXXC1Q9P0U4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.83■■□□□ 1.09
CXXC1Q9P0U4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.83■■□□□ 1.09
CXXC1Q9P0U4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CXXC1Q9P0U4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CXXC1Q9P0U4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.83■■□□□ 1.08
CXXC1Q9P0U4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.83■■□□□ 1.08
CXXC1Q9P0U4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CXXC1Q9P0U4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CXXC1Q9P0U4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
CXXC1Q9P0U4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.82■■□□□ 1.08
CXXC1Q9P0U4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CXXC1Q9P0U4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CXXC1Q9P0U4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.82■■□□□ 1.08
CXXC1Q9P0U4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
CXXC1Q9P0U4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CXXC1Q9P0U4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.82■■□□□ 1.08
CXXC1Q9P0U4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CXXC1Q9P0U4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CXXC1Q9P0U4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.82■■□□□ 1.08
CXXC1Q9P0U4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CXXC1Q9P0U4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CXXC1Q9P0U4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CXXC1Q9P0U4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CXXC1Q9P0U4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CXXC1Q9P0U4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.81■■□□□ 1.08
CXXC1Q9P0U4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CXXC1Q9P0U4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CXXC1Q9P0U4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CXXC1Q9P0U4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CXXC1Q9P0U4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CXXC1Q9P0U4 NIFKP9-201ENST00000419265 221 ntBASIC21.81■■□□□ 1.08
CXXC1Q9P0U4 KSR1P1-201ENST00000446298 240 ntBASIC21.81■■□□□ 1.08
CXXC1Q9P0U4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.81■■□□□ 1.08
CXXC1Q9P0U4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.81■■□□□ 1.08
CXXC1Q9P0U4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CXXC1Q9P0U4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.81■■□□□ 1.08
CXXC1Q9P0U4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
CXXC1Q9P0U4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.81■■□□□ 1.08
CXXC1Q9P0U4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CXXC1Q9P0U4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CXXC1Q9P0U4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CXXC1Q9P0U4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.81■■□□□ 1.08
CXXC1Q9P0U4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.81■■□□□ 1.08
CXXC1Q9P0U4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CXXC1Q9P0U4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CXXC1Q9P0U4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.8■■□□□ 1.08
CXXC1Q9P0U4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.8■■□□□ 1.08
CXXC1Q9P0U4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CXXC1Q9P0U4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.8■■□□□ 1.08
CXXC1Q9P0U4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.8■■□□□ 1.08
CXXC1Q9P0U4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CXXC1Q9P0U4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.8■■□□□ 1.08
CXXC1Q9P0U4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.8■■□□□ 1.08
CXXC1Q9P0U4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
CXXC1Q9P0U4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CXXC1Q9P0U4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CXXC1Q9P0U4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CXXC1Q9P0U4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CXXC1Q9P0U4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
CXXC1Q9P0U4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.79■■□□□ 1.08
CXXC1Q9P0U4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
CXXC1Q9P0U4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CXXC1Q9P0U4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CXXC1Q9P0U4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CXXC1Q9P0U4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CXXC1Q9P0U4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.79■■□□□ 1.08
CXXC1Q9P0U4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CXXC1Q9P0U4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.79■■□□□ 1.08
CXXC1Q9P0U4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.79■■□□□ 1.08
CXXC1Q9P0U4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.79■■□□□ 1.08
CXXC1Q9P0U4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.79■■□□□ 1.08
CXXC1Q9P0U4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.79■■□□□ 1.08
CXXC1Q9P0U4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.79■■□□□ 1.08
CXXC1Q9P0U4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.79■■□□□ 1.08
CXXC1Q9P0U4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.79■■□□□ 1.08
CXXC1Q9P0U4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CXXC1Q9P0U4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms