Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 KRT18P20-201ENST00000548986 1279 ntBASIC13.91□□□□□ -0.18
CDC42SE2Q9NRR3 CCDC92B-201ENST00000575506 885 ntBASIC13.91□□□□□ -0.18
CDC42SE2Q9NRR3 AC104187.1-201ENST00000607510 612 ntBASIC13.91□□□□□ -0.18
CDC42SE2Q9NRR3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC13.91□□□□□ -0.18
CDC42SE2Q9NRR3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42SE2Q9NRR3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC13.91□□□□□ -0.18
CDC42SE2Q9NRR3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CDC42SE2Q9NRR3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42SE2Q9NRR3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42SE2Q9NRR3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42SE2Q9NRR3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42SE2Q9NRR3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42SE2Q9NRR3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42SE2Q9NRR3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42SE2Q9NRR3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42SE2Q9NRR3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC13.91□□□□□ -0.18
CDC42SE2Q9NRR3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 TMEM179-206ENST00000616017 1645 ntBASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 AC027612.3-201ENST00000413684 1047 ntBASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 AP001160.3-201ENST00000601484 763 ntBASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 AC243732.1-201ENST00000612648 864 ntBASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 H19-201ENST00000411754 1788 ntTSL 5 BASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 AL158211.5-201ENST00000623583 2518 ntBASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42SE2Q9NRR3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CDC42SE2Q9NRR3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.89□□□□□ -0.19
CDC42SE2Q9NRR3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42SE2Q9NRR3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42SE2Q9NRR3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42SE2Q9NRR3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42SE2Q9NRR3 LINC02228-203ENST00000641970 1355 ntBASIC13.89□□□□□ -0.19
CDC42SE2Q9NRR3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42SE2Q9NRR3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42SE2Q9NRR3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42SE2Q9NRR3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42SE2Q9NRR3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC13.89□□□□□ -0.19
CDC42SE2Q9NRR3 AC091799.1-201ENST00000422823 811 ntBASIC13.89□□□□□ -0.19
CDC42SE2Q9NRR3 AC007322.3-201ENST00000426526 701 ntBASIC13.89□□□□□ -0.19
CDC42SE2Q9NRR3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC13.89□□□□□ -0.19
CDC42SE2Q9NRR3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42SE2Q9NRR3 FAM21FP-204ENST00000608637 956 ntBASIC13.89□□□□□ -0.19
CDC42SE2Q9NRR3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC13.89□□□□□ -0.19
CDC42SE2Q9NRR3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC13.89□□□□□ -0.19
CDC42SE2Q9NRR3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42SE2Q9NRR3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC13.89□□□□□ -0.19
CDC42SE2Q9NRR3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC13.89□□□□□ -0.19
CDC42SE2Q9NRR3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.89□□□□□ -0.19
CDC42SE2Q9NRR3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDC42SE2Q9NRR3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
CDC42SE2Q9NRR3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 AL691432.2-201ENST00000607222 2038 ntBASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 AC087289.5-201ENST00000586076 3175 ntBASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 AC105265.2-201ENST00000467189 838 ntBASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 AC142381.2-201ENST00000566120 298 ntBASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42SE2Q9NRR3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CDC42SE2Q9NRR3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
CDC42SE2Q9NRR3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC13.87□□□□□ -0.19
CDC42SE2Q9NRR3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42SE2Q9NRR3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42SE2Q9NRR3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms