Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.17■□□□□ 0.98
LRRC3Q9BY71 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC3Q9BY71 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC3Q9BY71 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.17■□□□□ 0.98
LRRC3Q9BY71 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.17■□□□□ 0.98
LRRC3Q9BY71 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC3Q9BY71 AC007375.3-201ENST00000600936 2314 ntBASIC21.17■□□□□ 0.98
LRRC3Q9BY71 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC3Q9BY71 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.16■□□□□ 0.98
LRRC3Q9BY71 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.16■□□□□ 0.98
LRRC3Q9BY71 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC3Q9BY71 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC3Q9BY71 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC3Q9BY71 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.16■□□□□ 0.98
LRRC3Q9BY71 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.16■□□□□ 0.98
LRRC3Q9BY71 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC3Q9BY71 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.16■□□□□ 0.98
LRRC3Q9BY71 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC3Q9BY71 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC3Q9BY71 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC3Q9BY71 AC012618.2-201ENST00000428058 849 ntBASIC21.16■□□□□ 0.98
LRRC3Q9BY71 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC3Q9BY71 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
LRRC3Q9BY71 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC3Q9BY71 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.16■□□□□ 0.98
LRRC3Q9BY71 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.16■□□□□ 0.98
LRRC3Q9BY71 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC3Q9BY71 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC3Q9BY71 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.16■□□□□ 0.98
LRRC3Q9BY71 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
LRRC3Q9BY71 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC3Q9BY71 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC3Q9BY71 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.15■□□□□ 0.98
LRRC3Q9BY71 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC3Q9BY71 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.15■□□□□ 0.98
LRRC3Q9BY71 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC3Q9BY71 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC3Q9BY71 RPS2P55-201ENST00000397318 883 ntBASIC21.15■□□□□ 0.98
LRRC3Q9BY71 AC239809.2-201ENST00000415381 517 ntBASIC21.15■□□□□ 0.98
LRRC3Q9BY71 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.15■□□□□ 0.98
LRRC3Q9BY71 AC107956.1-201ENST00000494359 873 ntBASIC21.15■□□□□ 0.98
LRRC3Q9BY71 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.15■□□□□ 0.98
LRRC3Q9BY71 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.15■□□□□ 0.98
LRRC3Q9BY71 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC3Q9BY71 AC110285.5-201ENST00000611501 352 ntBASIC21.15■□□□□ 0.98
LRRC3Q9BY71 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.15■□□□□ 0.98
LRRC3Q9BY71 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC3Q9BY71 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC3Q9BY71 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC3Q9BY71 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.14■□□□□ 0.98
LRRC3Q9BY71 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
LRRC3Q9BY71 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.14■□□□□ 0.98
LRRC3Q9BY71 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LRRC3Q9BY71 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LRRC3Q9BY71 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
LRRC3Q9BY71 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LRRC3Q9BY71 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRC3Q9BY71 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRC3Q9BY71 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
LRRC3Q9BY71 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LRRC3Q9BY71 KRASP1-201ENST00000407852 552 ntBASIC21.14■□□□□ 0.97
LRRC3Q9BY71 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.14■□□□□ 0.97
LRRC3Q9BY71 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.14■□□□□ 0.97
LRRC3Q9BY71 AC023632.3-201ENST00000521633 145 ntBASIC21.14■□□□□ 0.97
LRRC3Q9BY71 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.14■□□□□ 0.97
LRRC3Q9BY71 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
LRRC3Q9BY71 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
LRRC3Q9BY71 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
LRRC3Q9BY71 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRC3Q9BY71 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRC3Q9BY71 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LRRC3Q9BY71 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LRRC3Q9BY71 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRC3Q9BY71 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
LRRC3Q9BY71 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRC3Q9BY71 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRC3Q9BY71 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LRRC3Q9BY71 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LRRC3Q9BY71 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
LRRC3Q9BY71 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRC3Q9BY71 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.13■□□□□ 0.97
LRRC3Q9BY71 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRC3Q9BY71 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.13■□□□□ 0.97
LRRC3Q9BY71 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.13■□□□□ 0.97
LRRC3Q9BY71 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.13■□□□□ 0.97
LRRC3Q9BY71 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRC3Q9BY71 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
LRRC3Q9BY71 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.13■□□□□ 0.97
LRRC3Q9BY71 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRC3Q9BY71 AC121338.2-201ENST00000622535 1744 ntBASIC21.12■□□□□ 0.97
LRRC3Q9BY71 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC3Q9BY71 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC3Q9BY71 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC3Q9BY71 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC3Q9BY71 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC3Q9BY71 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
LRRC3Q9BY71 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.12■□□□□ 0.97
LRRC3Q9BY71 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC3Q9BY71 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.12■□□□□ 0.97
LRRC3Q9BY71 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms