Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
USP9XQ93008 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
USP9XQ93008 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.77■□□□□ 0.43
USP9XQ93008 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.77■□□□□ 0.43
USP9XQ93008 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.77■□□□□ 0.43
USP9XQ93008 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.77■□□□□ 0.43
USP9XQ93008 AL356652.1-201ENST00000615962 565 ntBASIC17.77■□□□□ 0.43
USP9XQ93008 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.77■□□□□ 0.43
USP9XQ93008 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.77■□□□□ 0.43
USP9XQ93008 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
USP9XQ93008 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP9XQ93008 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP9XQ93008 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.76■□□□□ 0.43
USP9XQ93008 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.76■□□□□ 0.43
USP9XQ93008 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP9XQ93008 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP9XQ93008 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP9XQ93008 AC139887.4-201ENST00000607877 719 ntBASIC17.76■□□□□ 0.43
USP9XQ93008 AL121956.5-201ENST00000625261 221 ntBASIC17.76■□□□□ 0.43
USP9XQ93008 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP9XQ93008 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
USP9XQ93008 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
USP9XQ93008 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP9XQ93008 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
USP9XQ93008 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP9XQ93008 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP9XQ93008 PGM5P4-201ENST00000421970 445 ntBASIC17.76■□□□□ 0.43
USP9XQ93008 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.76■□□□□ 0.43
USP9XQ93008 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.76■□□□□ 0.43
USP9XQ93008 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP9XQ93008 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP9XQ93008 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.75■□□□□ 0.43
USP9XQ93008 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP9XQ93008 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP9XQ93008 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP9XQ93008 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.75■□□□□ 0.43
USP9XQ93008 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP9XQ93008 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
USP9XQ93008 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP9XQ93008 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
USP9XQ93008 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP9XQ93008 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
USP9XQ93008 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.75■□□□□ 0.43
USP9XQ93008 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.75■□□□□ 0.43
USP9XQ93008 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.75■□□□□ 0.43
USP9XQ93008 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP9XQ93008 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP9XQ93008 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.75■□□□□ 0.43
USP9XQ93008 AL390719.1-204ENST00000412397 1219 ntBASIC17.75■□□□□ 0.43
USP9XQ93008 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.75■□□□□ 0.43
USP9XQ93008 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP9XQ93008 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.74■□□□□ 0.43
USP9XQ93008 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP9XQ93008 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP9XQ93008 INGX-201ENST00000359239 846 ntBASIC17.74■□□□□ 0.43
USP9XQ93008 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP9XQ93008 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP9XQ93008 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.74■□□□□ 0.43
USP9XQ93008 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.74■□□□□ 0.43
USP9XQ93008 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.74■□□□□ 0.43
USP9XQ93008 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.74■□□□□ 0.43
USP9XQ93008 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
USP9XQ93008 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.74■□□□□ 0.43
USP9XQ93008 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP9XQ93008 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP9XQ93008 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
USP9XQ93008 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
USP9XQ93008 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
USP9XQ93008 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP9XQ93008 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP9XQ93008 AC117947.1-201ENST00000427448 529 ntBASIC17.74■□□□□ 0.43
USP9XQ93008 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.74■□□□□ 0.43
USP9XQ93008 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.74■□□□□ 0.43
USP9XQ93008 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP9XQ93008 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP9XQ93008 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP9XQ93008 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
USP9XQ93008 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP9XQ93008 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
USP9XQ93008 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.73■□□□□ 0.43
USP9XQ93008 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.73■□□□□ 0.43
USP9XQ93008 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
USP9XQ93008 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.73■□□□□ 0.43
USP9XQ93008 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP9XQ93008 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.73■□□□□ 0.43
USP9XQ93008 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP9XQ93008 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.73■□□□□ 0.43
USP9XQ93008 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP9XQ93008 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP9XQ93008 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP9XQ93008 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.73■□□□□ 0.43
USP9XQ93008 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.73■□□□□ 0.43
USP9XQ93008 AL031985.4-201ENST00000642138 673 ntBASIC17.73■□□□□ 0.43
USP9XQ93008 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.72■□□□□ 0.43
USP9XQ93008 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP9XQ93008 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP9XQ93008 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP9XQ93008 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP9XQ93008 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.72■□□□□ 0.43
USP9XQ93008 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms