Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC25.01■■□□□ 1.59
RTL9Q8NET4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
RTL9Q8NET4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC25.01■■□□□ 1.59
RTL9Q8NET4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC25.01■■□□□ 1.59
RTL9Q8NET4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RTL9Q8NET4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RTL9Q8NET4 RPS2P55-201ENST00000397318 883 ntBASIC25.01■■□□□ 1.59
RTL9Q8NET4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC25.01■■□□□ 1.59
RTL9Q8NET4 AC107956.1-201ENST00000494359 873 ntBASIC25.01■■□□□ 1.59
RTL9Q8NET4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
RTL9Q8NET4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RTL9Q8NET4 REXO1L12P-201ENST00000622156 912 ntBASIC25.01■■□□□ 1.59
RTL9Q8NET4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RTL9Q8NET4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RTL9Q8NET4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RTL9Q8NET4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RTL9Q8NET4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RTL9Q8NET4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC25■■□□□ 1.59
RTL9Q8NET4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC25■■□□□ 1.59
RTL9Q8NET4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC25■■□□□ 1.59
RTL9Q8NET4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC25■■□□□ 1.59
RTL9Q8NET4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RTL9Q8NET4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC25■■□□□ 1.59
RTL9Q8NET4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC25■■□□□ 1.59
RTL9Q8NET4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC25■■□□□ 1.59
RTL9Q8NET4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RTL9Q8NET4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC25■■□□□ 1.59
RTL9Q8NET4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
RTL9Q8NET4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
RTL9Q8NET4 TSPY7P-201ENST00000431358 1114 ntBASIC25■■□□□ 1.59
RTL9Q8NET4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC25■■□□□ 1.59
RTL9Q8NET4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RTL9Q8NET4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC25■■□□□ 1.59
RTL9Q8NET4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC25■■□□□ 1.59
RTL9Q8NET4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC25■■□□□ 1.59
RTL9Q8NET4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
RTL9Q8NET4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
RTL9Q8NET4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC25■■□□□ 1.59
RTL9Q8NET4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25■■□□□ 1.59
RTL9Q8NET4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC24.99■■□□□ 1.59
RTL9Q8NET4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
RTL9Q8NET4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC24.99■■□□□ 1.59
RTL9Q8NET4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC24.99■■□□□ 1.59
RTL9Q8NET4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC24.99■■□□□ 1.59
RTL9Q8NET4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC24.99■■□□□ 1.59
RTL9Q8NET4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
RTL9Q8NET4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC24.99■■□□□ 1.59
RTL9Q8NET4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RTL9Q8NET4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
RTL9Q8NET4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC24.99■■□□□ 1.59
RTL9Q8NET4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
RTL9Q8NET4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC24.98■■□□□ 1.59
RTL9Q8NET4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC24.98■■□□□ 1.59
RTL9Q8NET4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC24.98■■□□□ 1.59
RTL9Q8NET4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RTL9Q8NET4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
RTL9Q8NET4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
RTL9Q8NET4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.98■■□□□ 1.59
RTL9Q8NET4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC24.98■■□□□ 1.59
RTL9Q8NET4 BX088651.1-201ENST00000540551 451 ntBASIC24.98■■□□□ 1.59
RTL9Q8NET4 RARRES2P10-201ENST00000564312 460 ntBASIC24.98■■□□□ 1.59
RTL9Q8NET4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
RTL9Q8NET4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC24.98■■□□□ 1.59
RTL9Q8NET4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.98■■□□□ 1.59
RTL9Q8NET4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
RTL9Q8NET4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RTL9Q8NET4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.98■■□□□ 1.59
RTL9Q8NET4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.98■■□□□ 1.59
RTL9Q8NET4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
RTL9Q8NET4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RTL9Q8NET4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC24.98■■□□□ 1.59
RTL9Q8NET4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
RTL9Q8NET4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC24.97■■□□□ 1.59
RTL9Q8NET4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RTL9Q8NET4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RTL9Q8NET4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RTL9Q8NET4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC24.97■■□□□ 1.59
RTL9Q8NET4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC24.97■■□□□ 1.59
RTL9Q8NET4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC24.97■■□□□ 1.59
RTL9Q8NET4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC24.97■■□□□ 1.59
RTL9Q8NET4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RTL9Q8NET4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC24.97■■□□□ 1.59
RTL9Q8NET4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC24.97■■□□□ 1.59
RTL9Q8NET4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
RTL9Q8NET4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC24.96■■□□□ 1.59
RTL9Q8NET4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC24.96■■□□□ 1.59
RTL9Q8NET4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
RTL9Q8NET4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
RTL9Q8NET4 MIR1224-201ENST00000408193 85 ntBASIC24.96■■□□□ 1.59
RTL9Q8NET4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RTL9Q8NET4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RTL9Q8NET4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RTL9Q8NET4 Six3os1_6.1-201ENST00000620790 196 ntBASIC24.96■■□□□ 1.59
RTL9Q8NET4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RTL9Q8NET4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RTL9Q8NET4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
RTL9Q8NET4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC24.96■■□□□ 1.59
RTL9Q8NET4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RTL9Q8NET4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC24.96■■□□□ 1.59
RTL9Q8NET4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms