Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71LQ8N9Z2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71LQ8N9Z2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71LQ8N9Z2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
CCDC71LQ8N9Z2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCDC71LQ8N9Z2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC71LQ8N9Z2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC71LQ8N9Z2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC71LQ8N9Z2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
CCDC71LQ8N9Z2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC71LQ8N9Z2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC71LQ8N9Z2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC71LQ8N9Z2 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC71LQ8N9Z2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC71LQ8N9Z2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC71LQ8N9Z2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC71LQ8N9Z2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CCDC71LQ8N9Z2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC71LQ8N9Z2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCDC71LQ8N9Z2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CCDC71LQ8N9Z2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC71LQ8N9Z2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC71LQ8N9Z2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC71LQ8N9Z2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC71LQ8N9Z2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 AL356441.2-201ENST00000443009 864 ntBASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 AC131281.2-201ENST00000520478 145 ntBASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 AL020996.1-203ENST00000536896 2307 ntBASIC16.78■□□□□ 0.28
CCDC71LQ8N9Z2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC71LQ8N9Z2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC71LQ8N9Z2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
CCDC71LQ8N9Z2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC71LQ8N9Z2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC71LQ8N9Z2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC71LQ8N9Z2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC71LQ8N9Z2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC71LQ8N9Z2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC71LQ8N9Z2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC71LQ8N9Z2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC71LQ8N9Z2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC71LQ8N9Z2 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC71LQ8N9Z2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC71LQ8N9Z2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC71LQ8N9Z2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCDC71LQ8N9Z2 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.77■□□□□ 0.27
CCDC71LQ8N9Z2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CCDC71LQ8N9Z2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC71LQ8N9Z2 TMEM179-206ENST00000616017 1645 ntBASIC16.77■□□□□ 0.27
CCDC71LQ8N9Z2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC71LQ8N9Z2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC71LQ8N9Z2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.77■□□□□ 0.27
CCDC71LQ8N9Z2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC71LQ8N9Z2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71LQ8N9Z2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71LQ8N9Z2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71LQ8N9Z2 AC120498.9-201ENST00000339021 3867 ntBASIC16.76■□□□□ 0.27
CCDC71LQ8N9Z2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71LQ8N9Z2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71LQ8N9Z2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71LQ8N9Z2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71LQ8N9Z2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC71LQ8N9Z2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC71LQ8N9Z2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC71LQ8N9Z2 AC120498.10-201ENST00000621827 505 ntBASIC16.76■□□□□ 0.27
CCDC71LQ8N9Z2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71LQ8N9Z2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CCDC71LQ8N9Z2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CCDC71LQ8N9Z2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71LQ8N9Z2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71LQ8N9Z2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71LQ8N9Z2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71LQ8N9Z2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CCDC71LQ8N9Z2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71LQ8N9Z2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71LQ8N9Z2 TSPY26P-201ENST00000476365 1326 ntBASIC16.75■□□□□ 0.27
CCDC71LQ8N9Z2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71LQ8N9Z2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms