Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC25.17■■□□□ 1.62
DDX60Q8IY21 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC25.17■■□□□ 1.62
DDX60Q8IY21 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
DDX60Q8IY21 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC25.17■■□□□ 1.62
DDX60Q8IY21 AL121829.2-201ENST00000620908 328 ntBASIC25.17■■□□□ 1.62
DDX60Q8IY21 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
DDX60Q8IY21 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
DDX60Q8IY21 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
DDX60Q8IY21 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC25.17■■□□□ 1.62
DDX60Q8IY21 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
DDX60Q8IY21 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC25.17■■□□□ 1.62
DDX60Q8IY21 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC25.17■■□□□ 1.62
DDX60Q8IY21 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC25.17■■□□□ 1.62
DDX60Q8IY21 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC25.17■■□□□ 1.62
DDX60Q8IY21 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC25.17■■□□□ 1.62
DDX60Q8IY21 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC25.17■■□□□ 1.62
DDX60Q8IY21 SNX21-213ENST00000614929 587 ntTSL 5 BASIC25.17■■□□□ 1.62
DDX60Q8IY21 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
DDX60Q8IY21 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC25.17■■□□□ 1.62
DDX60Q8IY21 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
DDX60Q8IY21 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC25.16■■□□□ 1.62
DDX60Q8IY21 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
DDX60Q8IY21 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
DDX60Q8IY21 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
DDX60Q8IY21 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC25.16■■□□□ 1.62
DDX60Q8IY21 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
DDX60Q8IY21 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC25.16■■□□□ 1.62
DDX60Q8IY21 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
DDX60Q8IY21 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC25.16■■□□□ 1.62
DDX60Q8IY21 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC25.16■■□□□ 1.62
DDX60Q8IY21 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
DDX60Q8IY21 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
DDX60Q8IY21 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
DDX60Q8IY21 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
DDX60Q8IY21 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
DDX60Q8IY21 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
DDX60Q8IY21 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
DDX60Q8IY21 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
DDX60Q8IY21 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
DDX60Q8IY21 ECEL1P3-201ENST00000427961 737 ntBASIC25.15■■□□□ 1.62
DDX60Q8IY21 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC25.15■■□□□ 1.62
DDX60Q8IY21 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
DDX60Q8IY21 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
DDX60Q8IY21 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
DDX60Q8IY21 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
DDX60Q8IY21 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
DDX60Q8IY21 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
DDX60Q8IY21 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC25.15■■□□□ 1.62
DDX60Q8IY21 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
DDX60Q8IY21 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
DDX60Q8IY21 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
DDX60Q8IY21 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC25.14■■□□□ 1.62
DDX60Q8IY21 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
DDX60Q8IY21 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
DDX60Q8IY21 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
DDX60Q8IY21 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
DDX60Q8IY21 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC25.14■■□□□ 1.61
DDX60Q8IY21 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC25.14■■□□□ 1.61
DDX60Q8IY21 CABP2-204ENST00000636477 941 ntTSL 5 BASIC25.14■■□□□ 1.61
DDX60Q8IY21 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
DDX60Q8IY21 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
DDX60Q8IY21 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DDX60Q8IY21 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
DDX60Q8IY21 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
DDX60Q8IY21 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DDX60Q8IY21 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC25.13■■□□□ 1.61
DDX60Q8IY21 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DDX60Q8IY21 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC25.13■■□□□ 1.61
DDX60Q8IY21 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
DDX60Q8IY21 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
DDX60Q8IY21 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
DDX60Q8IY21 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
DDX60Q8IY21 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
DDX60Q8IY21 BID-212ENST00000614949 1988 ntTSL 5 BASIC25.12■■□□□ 1.61
DDX60Q8IY21 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC25.12■■□□□ 1.61
DDX60Q8IY21 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX60Q8IY21 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
DDX60Q8IY21 FEM1AP4-201ENST00000443167 1987 ntBASIC25.12■■□□□ 1.61
DDX60Q8IY21 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
DDX60Q8IY21 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
DDX60Q8IY21 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC25.12■■□□□ 1.61
DDX60Q8IY21 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX60Q8IY21 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
DDX60Q8IY21 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
DDX60Q8IY21 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
DDX60Q8IY21 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
DDX60Q8IY21 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC25.11■■□□□ 1.61
DDX60Q8IY21 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC25.11■■□□□ 1.61
DDX60Q8IY21 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
DDX60Q8IY21 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
DDX60Q8IY21 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
DDX60Q8IY21 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC25.11■■□□□ 1.61
DDX60Q8IY21 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC25.11■■□□□ 1.61
DDX60Q8IY21 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
DDX60Q8IY21 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC25.11■■□□□ 1.61
DDX60Q8IY21 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC25.11■■□□□ 1.61
DDX60Q8IY21 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC25.11■■□□□ 1.61
DDX60Q8IY21 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC25.11■■□□□ 1.61
DDX60Q8IY21 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
DDX60Q8IY21 LINC01023-201ENST00000606054 436 ntBASIC25.11■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms