Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC28Q86X40 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC28Q86X40 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC28Q86X40 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC28Q86X40 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
LRRC28Q86X40 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC28Q86X40 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
LRRC28Q86X40 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.94■□□□□ 0.46
LRRC28Q86X40 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.94■□□□□ 0.46
LRRC28Q86X40 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.94■□□□□ 0.46
LRRC28Q86X40 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.94■□□□□ 0.46
LRRC28Q86X40 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRC28Q86X40 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC28Q86X40 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
LRRC28Q86X40 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRC28Q86X40 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC28Q86X40 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC28Q86X40 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC28Q86X40 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC28Q86X40 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC28Q86X40 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
LRRC28Q86X40 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC28Q86X40 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC28Q86X40 AP006587.3-201ENST00000525742 1516 ntBASIC17.93■□□□□ 0.46
LRRC28Q86X40 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC28Q86X40 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC28Q86X40 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.93■□□□□ 0.46
LRRC28Q86X40 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.93■□□□□ 0.46
LRRC28Q86X40 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC28Q86X40 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.93■□□□□ 0.46
LRRC28Q86X40 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.93■□□□□ 0.46
LRRC28Q86X40 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.93■□□□□ 0.46
LRRC28Q86X40 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.93■□□□□ 0.46
LRRC28Q86X40 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.93■□□□□ 0.46
LRRC28Q86X40 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC28Q86X40 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC28Q86X40 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
LRRC28Q86X40 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC28Q86X40 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC28Q86X40 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC28Q86X40 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC28Q86X40 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC28Q86X40 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.93■□□□□ 0.46
LRRC28Q86X40 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC28Q86X40 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
LRRC28Q86X40 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC28Q86X40 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
LRRC28Q86X40 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC28Q86X40 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC28Q86X40 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC28Q86X40 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LRRC28Q86X40 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC28Q86X40 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC28Q86X40 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC28Q86X40 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRC28Q86X40 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
LRRC28Q86X40 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC28Q86X40 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC28Q86X40 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
LRRC28Q86X40 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.92■□□□□ 0.46
LRRC28Q86X40 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC28Q86X40 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC28Q86X40 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC28Q86X40 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRC28Q86X40 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC28Q86X40 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC28Q86X40 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.91■□□□□ 0.46
LRRC28Q86X40 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC28Q86X40 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LRRC28Q86X40 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC28Q86X40 AC004854.2-201ENST00000608450 1441 ntBASIC17.91■□□□□ 0.46
LRRC28Q86X40 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC28Q86X40 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
LRRC28Q86X40 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC28Q86X40 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.91■□□□□ 0.46
LRRC28Q86X40 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.91■□□□□ 0.46
LRRC28Q86X40 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC28Q86X40 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.91■□□□□ 0.46
LRRC28Q86X40 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC28Q86X40 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.91■□□□□ 0.46
LRRC28Q86X40 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.91■□□□□ 0.46
LRRC28Q86X40 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.91■□□□□ 0.46
LRRC28Q86X40 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC28Q86X40 AP000974.1-201ENST00000623909 2387 ntBASIC17.91■□□□□ 0.46
LRRC28Q86X40 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC28Q86X40 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC28Q86X40 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC28Q86X40 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC28Q86X40 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC28Q86X40 TNXA-203ENST00000507684 2038 ntBASIC17.91■□□□□ 0.46
LRRC28Q86X40 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC28Q86X40 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC28Q86X40 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
LRRC28Q86X40 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC28Q86X40 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.9■□□□□ 0.46
LRRC28Q86X40 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
LRRC28Q86X40 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
LRRC28Q86X40 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LRRC28Q86X40 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC28Q86X40 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms