Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 KRT87P-202ENST00000534226 1464 ntBASIC18.59■□□□□ 0.57
TUBA1AQ71U36 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
TUBA1AQ71U36 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.59■□□□□ 0.57
TUBA1AQ71U36 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBA1AQ71U36 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBA1AQ71U36 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBA1AQ71U36 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.59■□□□□ 0.57
TUBA1AQ71U36 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBA1AQ71U36 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.59■□□□□ 0.57
TUBA1AQ71U36 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.59■□□□□ 0.57
TUBA1AQ71U36 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.59■□□□□ 0.57
TUBA1AQ71U36 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.59■□□□□ 0.57
TUBA1AQ71U36 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBA1AQ71U36 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.59■□□□□ 0.57
TUBA1AQ71U36 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.59■□□□□ 0.57
TUBA1AQ71U36 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBA1AQ71U36 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.59■□□□□ 0.57
TUBA1AQ71U36 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.59■□□□□ 0.57
TUBA1AQ71U36 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBA1AQ71U36 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TUBA1AQ71U36 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
TUBA1AQ71U36 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
TUBA1AQ71U36 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TUBA1AQ71U36 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TUBA1AQ71U36 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
TUBA1AQ71U36 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
TUBA1AQ71U36 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TUBA1AQ71U36 TNXA-203ENST00000507684 2038 ntBASIC18.58■□□□□ 0.56
TUBA1AQ71U36 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TUBA1AQ71U36 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TUBA1AQ71U36 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.58■□□□□ 0.56
TUBA1AQ71U36 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.58■□□□□ 0.56
TUBA1AQ71U36 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.58■□□□□ 0.56
TUBA1AQ71U36 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.58■□□□□ 0.56
TUBA1AQ71U36 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.58■□□□□ 0.56
TUBA1AQ71U36 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.58■□□□□ 0.56
TUBA1AQ71U36 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.58■□□□□ 0.56
TUBA1AQ71U36 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TUBA1AQ71U36 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TUBA1AQ71U36 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TUBA1AQ71U36 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TUBA1AQ71U36 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TUBA1AQ71U36 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.58■□□□□ 0.56
TUBA1AQ71U36 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TUBA1AQ71U36 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TUBA1AQ71U36 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.58■□□□□ 0.56
TUBA1AQ71U36 AL512408.1-201ENST00000569378 2000 ntBASIC18.57■□□□□ 0.56
TUBA1AQ71U36 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
TUBA1AQ71U36 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
TUBA1AQ71U36 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TUBA1AQ71U36 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TUBA1AQ71U36 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TUBA1AQ71U36 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TUBA1AQ71U36 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TUBA1AQ71U36 AC099778.1-201ENST00000568593 1911 ntBASIC18.57■□□□□ 0.56
TUBA1AQ71U36 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.57■□□□□ 0.56
TUBA1AQ71U36 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TUBA1AQ71U36 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TUBA1AQ71U36 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.57■□□□□ 0.56
TUBA1AQ71U36 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TUBA1AQ71U36 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.57■□□□□ 0.56
TUBA1AQ71U36 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.57■□□□□ 0.56
TUBA1AQ71U36 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.57■□□□□ 0.56
TUBA1AQ71U36 AC104187.1-201ENST00000607510 612 ntBASIC18.57■□□□□ 0.56
TUBA1AQ71U36 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TUBA1AQ71U36 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TUBA1AQ71U36 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TUBA1AQ71U36 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TUBA1AQ71U36 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TUBA1AQ71U36 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.57■□□□□ 0.56
TUBA1AQ71U36 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TUBA1AQ71U36 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.57■□□□□ 0.56
TUBA1AQ71U36 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TUBA1AQ71U36 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1AQ71U36 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.56■□□□□ 0.56
TUBA1AQ71U36 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1AQ71U36 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TUBA1AQ71U36 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1AQ71U36 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1AQ71U36 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1AQ71U36 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.56■□□□□ 0.56
TUBA1AQ71U36 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1AQ71U36 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1AQ71U36 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.56■□□□□ 0.56
TUBA1AQ71U36 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1AQ71U36 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.56■□□□□ 0.56
TUBA1AQ71U36 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1AQ71U36 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1AQ71U36 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1AQ71U36 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1AQ71U36 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1AQ71U36 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TUBA1AQ71U36 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TUBA1AQ71U36 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TUBA1AQ71U36 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TUBA1AQ71U36 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TUBA1AQ71U36 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TUBA1AQ71U36 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.55■□□□□ 0.56
TUBA1AQ71U36 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.55■□□□□ 0.56
TUBA1AQ71U36 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms