Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYPL1Q16563 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYPL1Q16563 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.81■□□□□ 0.6
SYPL1Q16563 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SYPL1Q16563 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.81■□□□□ 0.6
SYPL1Q16563 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.81■□□□□ 0.6
SYPL1Q16563 RARRES2P6-201ENST00000567333 442 ntBASIC18.81■□□□□ 0.6
SYPL1Q16563 MFSD11-216ENST00000590393 1141 ntBASIC18.81■□□□□ 0.6
SYPL1Q16563 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.81■□□□□ 0.6
SYPL1Q16563 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SYPL1Q16563 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.81■□□□□ 0.6
SYPL1Q16563 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYPL1Q16563 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SYPL1Q16563 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
SYPL1Q16563 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SYPL1Q16563 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.81■□□□□ 0.6
SYPL1Q16563 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYPL1Q16563 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SYPL1Q16563 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SYPL1Q16563 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.8■□□□□ 0.6
SYPL1Q16563 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYPL1Q16563 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYPL1Q16563 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SYPL1Q16563 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYPL1Q16563 CYP21A1P-202ENST00000354927 1481 ntBASIC18.8■□□□□ 0.6
SYPL1Q16563 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYPL1Q16563 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYPL1Q16563 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.8■□□□□ 0.6
SYPL1Q16563 AC007322.4-201ENST00000509611 723 ntBASIC18.8■□□□□ 0.6
SYPL1Q16563 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.8■□□□□ 0.6
SYPL1Q16563 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.8■□□□□ 0.6
SYPL1Q16563 AL356652.1-201ENST00000615962 565 ntBASIC18.8■□□□□ 0.6
SYPL1Q16563 AC013268.1-206ENST00000638368 961 ntBASIC18.8■□□□□ 0.6
SYPL1Q16563 AC112229.1-201ENST00000639295 961 ntBASIC18.8■□□□□ 0.6
SYPL1Q16563 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SYPL1Q16563 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SYPL1Q16563 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYPL1Q16563 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
SYPL1Q16563 AC087633.2-202ENST00000565166 1439 ntBASIC18.8■□□□□ 0.6
SYPL1Q16563 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.8■□□□□ 0.6
SYPL1Q16563 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.8■□□□□ 0.6
SYPL1Q16563 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.8■□□□□ 0.6
SYPL1Q16563 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SYPL1Q16563 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SYPL1Q16563 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SYPL1Q16563 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.79■□□□□ 0.6
SYPL1Q16563 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYPL1Q16563 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYPL1Q16563 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
SYPL1Q16563 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYPL1Q16563 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYPL1Q16563 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYPL1Q16563 AC016769.1-201ENST00000409132 1010 ntBASIC18.79■□□□□ 0.6
SYPL1Q16563 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.79■□□□□ 0.6
SYPL1Q16563 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SYPL1Q16563 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.79■□□□□ 0.6
SYPL1Q16563 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
SYPL1Q16563 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.79■□□□□ 0.6
SYPL1Q16563 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SYPL1Q16563 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SYPL1Q16563 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYPL1Q16563 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYPL1Q16563 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYPL1Q16563 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYPL1Q16563 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
SYPL1Q16563 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SYPL1Q16563 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYPL1Q16563 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.78■□□□□ 0.6
SYPL1Q16563 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYPL1Q16563 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.78■□□□□ 0.6
SYPL1Q16563 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYPL1Q16563 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYPL1Q16563 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SYPL1Q16563 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SYPL1Q16563 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYPL1Q16563 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYPL1Q16563 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYPL1Q16563 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
SYPL1Q16563 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SYPL1Q16563 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYPL1Q16563 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.78■□□□□ 0.6
SYPL1Q16563 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.78■□□□□ 0.6
SYPL1Q16563 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYPL1Q16563 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.78■□□□□ 0.6
SYPL1Q16563 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYPL1Q16563 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYPL1Q16563 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.78■□□□□ 0.6
SYPL1Q16563 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYPL1Q16563 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYPL1Q16563 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYPL1Q16563 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.77■□□□□ 0.6
SYPL1Q16563 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYPL1Q16563 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYPL1Q16563 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.77■□□□□ 0.6
SYPL1Q16563 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYPL1Q16563 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYPL1Q16563 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYPL1Q16563 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.77■□□□□ 0.6
SYPL1Q16563 PGM5P4-201ENST00000421970 445 ntBASIC18.77■□□□□ 0.6
SYPL1Q16563 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms