Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RIPPLY3P57055 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RIPPLY3P57055 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RIPPLY3P57055 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RIPPLY3P57055 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC16.74■□□□□ 0.27
RIPPLY3P57055 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RIPPLY3P57055 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RIPPLY3P57055 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RIPPLY3P57055 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RIPPLY3P57055 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RIPPLY3P57055 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RIPPLY3P57055 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RIPPLY3P57055 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RIPPLY3P57055 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.74■□□□□ 0.27
RIPPLY3P57055 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.74■□□□□ 0.27
RIPPLY3P57055 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.74■□□□□ 0.27
RIPPLY3P57055 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.74■□□□□ 0.27
RIPPLY3P57055 AC091390.4-202ENST00000476426 537 ntBASIC16.74■□□□□ 0.27
RIPPLY3P57055 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.74■□□□□ 0.27
RIPPLY3P57055 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RIPPLY3P57055 C2orf69P3-201ENST00000565542 1120 ntBASIC16.74■□□□□ 0.27
RIPPLY3P57055 AC111152.3-201ENST00000569699 673 ntBASIC16.74■□□□□ 0.27
RIPPLY3P57055 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.74■□□□□ 0.27
RIPPLY3P57055 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC16.74■□□□□ 0.27
RIPPLY3P57055 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.74■□□□□ 0.27
RIPPLY3P57055 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RIPPLY3P57055 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RIPPLY3P57055 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RIPPLY3P57055 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.74■□□□□ 0.27
RIPPLY3P57055 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RIPPLY3P57055 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RIPPLY3P57055 ABCB10P4-201ENST00000566803 2184 ntBASIC16.74■□□□□ 0.27
RIPPLY3P57055 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RIPPLY3P57055 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RIPPLY3P57055 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.73■□□□□ 0.27
RIPPLY3P57055 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RIPPLY3P57055 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RIPPLY3P57055 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RIPPLY3P57055 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
RIPPLY3P57055 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RIPPLY3P57055 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RIPPLY3P57055 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RIPPLY3P57055 AC117947.1-201ENST00000427448 529 ntBASIC16.73■□□□□ 0.27
RIPPLY3P57055 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.73■□□□□ 0.27
RIPPLY3P57055 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.73■□□□□ 0.27
RIPPLY3P57055 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
RIPPLY3P57055 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.73■□□□□ 0.27
RIPPLY3P57055 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RIPPLY3P57055 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RIPPLY3P57055 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16.73■□□□□ 0.27
RIPPLY3P57055 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC16.73■□□□□ 0.27
RIPPLY3P57055 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
RIPPLY3P57055 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RIPPLY3P57055 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RIPPLY3P57055 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RIPPLY3P57055 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RIPPLY3P57055 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.72■□□□□ 0.27
RIPPLY3P57055 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.72■□□□□ 0.27
RIPPLY3P57055 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RIPPLY3P57055 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RIPPLY3P57055 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RIPPLY3P57055 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RIPPLY3P57055 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.72■□□□□ 0.27
RIPPLY3P57055 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.72■□□□□ 0.27
RIPPLY3P57055 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RIPPLY3P57055 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RIPPLY3P57055 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RIPPLY3P57055 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.72■□□□□ 0.27
RIPPLY3P57055 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RIPPLY3P57055 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.72■□□□□ 0.27
RIPPLY3P57055 HMGN1P19-201ENST00000436976 333 ntBASIC16.72■□□□□ 0.27
RIPPLY3P57055 KRT16P5-201ENST00000455284 522 ntBASIC16.72■□□□□ 0.27
RIPPLY3P57055 CDV3P1-201ENST00000471403 739 ntBASIC16.72■□□□□ 0.27
RIPPLY3P57055 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.72■□□□□ 0.27
RIPPLY3P57055 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.72■□□□□ 0.27
RIPPLY3P57055 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RIPPLY3P57055 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.72■□□□□ 0.27
RIPPLY3P57055 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RIPPLY3P57055 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RIPPLY3P57055 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RIPPLY3P57055 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.71■□□□□ 0.27
RIPPLY3P57055 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RIPPLY3P57055 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RIPPLY3P57055 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RIPPLY3P57055 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.27
RIPPLY3P57055 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RIPPLY3P57055 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RIPPLY3P57055 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.71■□□□□ 0.27
RIPPLY3P57055 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.71■□□□□ 0.27
RIPPLY3P57055 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.71■□□□□ 0.27
RIPPLY3P57055 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.71■□□□□ 0.27
RIPPLY3P57055 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.27
RIPPLY3P57055 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RIPPLY3P57055 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RIPPLY3P57055 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.27
RIPPLY3P57055 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RIPPLY3P57055 AC008622.2-201ENST00000617006 1229 ntBASIC16.71■□□□□ 0.27
RIPPLY3P57055 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.71■□□□□ 0.27
RIPPLY3P57055 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RIPPLY3P57055 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms