Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGA2P52926 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGA2P52926 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HMGA2P52926 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.47■□□□□ 0.55
HMGA2P52926 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGA2P52926 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGA2P52926 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGA2P52926 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.46■□□□□ 0.55
HMGA2P52926 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.46■□□□□ 0.55
HMGA2P52926 LINC02228-203ENST00000641970 1355 ntBASIC18.46■□□□□ 0.55
HMGA2P52926 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.46■□□□□ 0.55
HMGA2P52926 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.46■□□□□ 0.55
HMGA2P52926 AC105265.2-201ENST00000467189 838 ntBASIC18.46■□□□□ 0.55
HMGA2P52926 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMGA2P52926 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.46■□□□□ 0.55
HMGA2P52926 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
HMGA2P52926 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.46■□□□□ 0.55
HMGA2P52926 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.46■□□□□ 0.55
HMGA2P52926 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGA2P52926 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMGA2P52926 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
HMGA2P52926 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.45■□□□□ 0.54
HMGA2P52926 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGA2P52926 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.45■□□□□ 0.54
HMGA2P52926 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.45■□□□□ 0.54
HMGA2P52926 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGA2P52926 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGA2P52926 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGA2P52926 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGA2P52926 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HMGA2P52926 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
HMGA2P52926 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGA2P52926 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGA2P52926 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGA2P52926 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGA2P52926 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
HMGA2P52926 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.45■□□□□ 0.54
HMGA2P52926 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.45■□□□□ 0.54
HMGA2P52926 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGA2P52926 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HMGA2P52926 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HMGA2P52926 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGA2P52926 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGA2P52926 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGA2P52926 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.44■□□□□ 0.54
HMGA2P52926 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGA2P52926 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGA2P52926 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.44■□□□□ 0.54
HMGA2P52926 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
HMGA2P52926 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
HMGA2P52926 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HMGA2P52926 AP000974.1-201ENST00000623909 2387 ntBASIC18.44■□□□□ 0.54
HMGA2P52926 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.44■□□□□ 0.54
HMGA2P52926 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGA2P52926 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
HMGA2P52926 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HMGA2P52926 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGA2P52926 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.44■□□□□ 0.54
HMGA2P52926 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
HMGA2P52926 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
HMGA2P52926 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGA2P52926 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGA2P52926 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGA2P52926 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGA2P52926 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGA2P52926 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGA2P52926 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
HMGA2P52926 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
HMGA2P52926 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.43■□□□□ 0.54
HMGA2P52926 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGA2P52926 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGA2P52926 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
HMGA2P52926 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.43■□□□□ 0.54
HMGA2P52926 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGA2P52926 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.43■□□□□ 0.54
HMGA2P52926 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.43■□□□□ 0.54
HMGA2P52926 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.43■□□□□ 0.54
HMGA2P52926 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGA2P52926 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGA2P52926 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
HMGA2P52926 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGA2P52926 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGA2P52926 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGA2P52926 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGA2P52926 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGA2P52926 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HMGA2P52926 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.42■□□□□ 0.54
HMGA2P52926 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGA2P52926 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
HMGA2P52926 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HMGA2P52926 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGA2P52926 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
HMGA2P52926 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGA2P52926 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.42■□□□□ 0.54
HMGA2P52926 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.42■□□□□ 0.54
HMGA2P52926 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
HMGA2P52926 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGA2P52926 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.42■□□□□ 0.54
HMGA2P52926 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGA2P52926 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms