Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.077e-12■■■□□ 16.1
NCBP2P52298 LYRM4-202ENST00000455814 450 ntTSL 38.01□□□□□ -1.137e-12■■■□□ 16.1
NCBP2P52298 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.59□□□□□ -1.517e-12■■■□□ 16.1
NCBP2P52298 PUM2-207ENST00000429419 547 ntTSL 53.92□□□□□ -1.788e-7■■■□□ 16.1
NCBP2P52298 CCNG2-203ENST00000497512 2051 ntTSL 1 (best)25.43■■□□□ 1.662e-8■■■□□ 16.1
NCBP2P52298 TAPT1-AS1-202ENST00000573308 1031 ntTSL 224.48■■□□□ 1.512e-8■■■□□ 16.1
NCBP2P52298 C1orf123-207ENST00000602807 490 nt23.11■■□□□ 1.292e-8■■■□□ 16.1
NCBP2P52298 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.262e-8■■■□□ 16.1
NCBP2P52298 PLEKHA1-206ENST00000463663 617 ntTSL 522.72■■□□□ 1.237e-16■■■□□ 16.1
NCBP2P52298 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.862e-8■■■□□ 16.1
NCBP2P52298 C1orf123-203ENST00000474227 841 ntTSL 220.34■□□□□ 0.852e-8■■■□□ 16.1
NCBP2P52298 C1orf123-202ENST00000470385 1009 ntTSL 1 (best)20.34■□□□□ 0.852e-8■■■□□ 16.1
NCBP2P52298 SPPL2B-204ENST00000587851 586 ntTSL 319.94■□□□□ 0.782e-8■■■□□ 16.1
NCBP2P52298 FP565260.6-208ENST00000623810 781 ntTSL 516.5■□□□□ 0.232e-8■■■□□ 16.1
NCBP2P52298 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.092e-8■■■□□ 16.1
NCBP2P52298 FP565260.6-209ENST00000624714 807 ntTSL 215.45■□□□□ 0.062e-8■■■□□ 16.1
NCBP2P52298 ARHGEF39-206ENST00000490970 1270 ntTSL 514.65□□□□□ -0.062e-8■■■□□ 16.1
NCBP2P52298 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.142e-8■■■□□ 16.1
NCBP2P52298 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.99□□□□□ -0.172e-8■■■□□ 16.1
NCBP2P52298 ARHGEF39-205ENST00000490638 4498 ntTSL 1 (best)13.99□□□□□ -0.172e-8■■■□□ 16.1
NCBP2P52298 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.182e-8■■■□□ 16.1
NCBP2P52298 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.292e-8■■■□□ 16.1
NCBP2P52298 ARHGEF39-203ENST00000475323 2862 ntTSL 212.68□□□□□ -0.382e-8■■■□□ 16.1
NCBP2P52298 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC11.49□□□□□ -0.572e-8■■■□□ 16.1
NCBP2P52298 ARHGEF39-201ENST00000378387 3769 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.842e-8■■■□□ 16.1
NCBP2P52298 AC138409.2-202ENST00000507274 458 ntBASIC4.54□□□□□ -1.682e-8■■■□□ 16.1
NCBP2P52298 PPP2R2D-207ENST00000616467 2058 ntTSL 1 (best)23.98■■□□□ 1.431e-8■■■□□ 16.1
NCBP2P52298 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.48■■□□□ 1.353e-6■■■□□ 16.1
NCBP2P52298 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.223e-6■■■□□ 16.1
NCBP2P52298 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.131e-8■■■□□ 16.1
NCBP2P52298 NAPB-206ENST00000487502 699 ntTSL 221.68■■□□□ 1.063e-6■■■□□ 16.1
NCBP2P52298 ARFGAP1-214ENST00000520485 1548 ntTSL 221.54■■□□□ 1.043e-6■■■□□ 16.1
NCBP2P52298 AKAP8L-203ENST00000594594 2251 ntTSL 521.37■■□□□ 1.013e-6■■■□□ 16.1
NCBP2P52298 NAPB-204ENST00000468128 782 ntTSL 520.1■□□□□ 0.813e-6■■■□□ 16.1
NCBP2P52298 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.42■□□□□ 0.73e-6■■■□□ 16.1
NCBP2P52298 TCIRG1-216ENST00000534673 848 ntTSL 319.04■□□□□ 0.641e-8■■■□□ 16.1
NCBP2P52298 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.563e-6■■■□□ 16.1
NCBP2P52298 AKAP8L-220ENST00000609519 2113 ntTSL 218.48■□□□□ 0.553e-6■■■□□ 16.1
NCBP2P52298 TCIRG1-206ENST00000527530 529 ntTSL 318.2■□□□□ 0.51e-8■■■□□ 16.1
NCBP2P52298 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.99■□□□□ 0.471e-8■■■□□ 16.1
NCBP2P52298 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.393e-6■■■□□ 16.1
NCBP2P52298 AKAP8L-209ENST00000595879 790 ntTSL 317.35■□□□□ 0.373e-6■■■□□ 16.1
NCBP2P52298 PPP2R2D-204ENST00000482010 1792 ntTSL 217.33■□□□□ 0.371e-8■■■□□ 16.1
NCBP2P52298 AKAP8L-202ENST00000593845 2749 ntTSL 217.02■□□□□ 0.323e-6■■■□□ 16.1
NCBP2P52298 ARFGAP1-211ENST00000519531 1490 ntTSL 316.8■□□□□ 0.283e-6■■■□□ 16.1
NCBP2P52298 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.261e-8■■■□□ 16.1
NCBP2P52298 AKAP8L-212ENST00000596750 906 ntTSL 316.61■□□□□ 0.253e-6■■■□□ 16.1
NCBP2P52298 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.183e-6■■■□□ 16.1
NCBP2P52298 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.88■□□□□ 0.133e-6■■■□□ 16.1
NCBP2P52298 AKAP8L-204ENST00000594893 1453 ntTSL 215.75■□□□□ 0.113e-6■■■□□ 16.1
NCBP2P52298 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.111e-8■■■□□ 16.1
NCBP2P52298 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.063e-6■■■□□ 16.1
NCBP2P52298 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.24■□□□□ 0.033e-6■■■□□ 16.1
NCBP2P52298 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.22■□□□□ 0.033e-6■■■□□ 16.1
NCBP2P52298 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.021e-8■■■□□ 16.1
NCBP2P52298 ARFGAP1-215ENST00000522403 995 ntTSL 514.92□□□□□ -0.023e-6■■■□□ 16.1
NCBP2P52298 DKC1-208ENST00000475423 587 ntTSL 214.86□□□□□ -0.031e-8■■■□□ 16.1
NCBP2P52298 TCIRG1-208ENST00000529364 868 ntTSL 314.53□□□□□ -0.081e-8■■■□□ 16.1
NCBP2P52298 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.183e-6■■■□□ 16.1
NCBP2P52298 ARFGAP1-221ENST00000549047 1040 ntTSL 513.87□□□□□ -0.193e-6■■■□□ 16.1
NCBP2P52298 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.193e-6■■■□□ 16.1
NCBP2P52298 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.223e-6■■■□□ 16.1
NCBP2P52298 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.223e-6■■■□□ 16.1
NCBP2P52298 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.05□□□□□ -0.323e-6■■■□□ 16.1
NCBP2P52298 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.91□□□□□ -0.343e-6■■■□□ 16.1
NCBP2P52298 ARFGAP1-218ENST00000523460 572 ntTSL 412.7□□□□□ -0.383e-6■■■□□ 16.1
NCBP2P52298 SLC39A7-204ENST00000463972 1410 ntTSL 212.67□□□□□ -0.383e-6■■■□□ 16.1
NCBP2P52298 RN7SKP255-201ENST00000363442 313 ntBASIC12.48□□□□□ -0.413e-11■■■□□ 16.1
NCBP2P52298 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.423e-6■■■□□ 16.1
NCBP2P52298 ARFGAP1-206ENST00000518601 905 ntTSL 512.22□□□□□ -0.453e-6■■■□□ 16.1
NCBP2P52298 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.463e-6■■■□□ 16.1
NCBP2P52298 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.493e-6■■■□□ 16.1
NCBP2P52298 MSN-206ENST00000609672 568 ntTSL 411.45□□□□□ -0.583e-6■■■□□ 16.1
NCBP2P52298 NAPB-203ENST00000432543 3754 ntTSL 2 BASIC11.41□□□□□ -0.583e-6■■■□□ 16.1
NCBP2P52298 PPP2R2D-202ENST00000470416 6203 ntTSL 1 (best)10.22□□□□□ -0.771e-8■■■□□ 16.1
NCBP2P52298 ADAM9-209ENST00000487273 3839 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.933e-6■■■□□ 16.1
NCBP2P52298 DKC1-207ENST00000473552 656 ntTSL 29.23□□□□□ -0.931e-8■■■□□ 16.1
NCBP2P52298 ADAM9-201ENST00000379917 3836 ntTSL 1 (best)9.19□□□□□ -0.943e-6■■■□□ 16.1
NCBP2P52298 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC8.88□□□□□ -0.993e-6■■■□□ 16.1
NCBP2P52298 ADAM9-207ENST00000481873 3793 ntTSL 1 (best)8.79□□□□□ -13e-6■■■□□ 16.1
NCBP2P52298 ADAM9-204ENST00000468065 3755 ntTSL 1 (best)8.64□□□□□ -1.033e-6■■■□□ 16.1
NCBP2P52298 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.143e-6■■■□□ 16.1
NCBP2P52298 DKC1-203ENST00000413910 851 ntTSL 57.3□□□□□ -1.241e-8■■■□□ 16.1
NCBP2P52298 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.273e-6■■■□□ 16.1
NCBP2P52298 NAPB-205ENST00000472855 1651 ntTSL 25.87□□□□□ -1.473e-6■■■□□ 16.1
NCBP2P52298 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.74□□□□□ -1.653e-6■■■□□ 16.1
NCBP2P52298 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.96■□□□□ 0.952e-10■■■□□ 16.1
NCBP2P52298 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.412e-10■■■□□ 16.1
NCBP2P52298 AK3-204ENST00000611749 4029 ntTSL 4 BASIC9.24□□□□□ -0.932e-10■■■□□ 16.1
NCBP2P52298 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.21□□□□□ -1.582e-10■■■□□ 16.1
NCBP2P52298 RALGPS2-209ENST00000495034 1970 ntTSL 215.95■□□□□ 0.142e-6■■■□□ 16
NCBP2P52298 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.072e-6■■■□□ 16
NCBP2P52298 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC12.04□□□□□ -0.482e-6■■■□□ 16
NCBP2P52298 AC243964.2-203ENST00000586169 379 ntTSL 214.65□□□□□ -0.061e-6■■■□□ 16
NCBP2P52298 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.65□□□□□ -0.061e-6■■■□□ 16
NCBP2P52298 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC12.56□□□□□ -0.41e-6■■■□□ 16
NCBP2P52298 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.45e-8■■■□□ 16
NCBP2P52298 PRPF39-202ENST00000424478 3174 ntTSL 212.62□□□□□ -0.395e-8■■■□□ 16
NCBP2P52298 PRPF39-204ENST00000553605 582 ntTSL 312.04□□□□□ -0.485e-8■■■□□ 16
NCBP2P52298 PRPF39-203ENST00000477626 3507 ntTSL 211.36□□□□□ -0.595e-8■■■□□ 16
Retrieved 100 of 18,329 protein–RNA pairs in 202.5 ms