RNA–Protein interactions for RNA: ENST00000500576.4

LYRM4-208, Transcript of LYR motif containing 4, humanhuman

TSL 2 BASIC

Gene LYRM4, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4-208ENST00000500576 AEBP2Q6ZN18 517 aaPredicted RBP28.76■■■□□ 2.19
LYRM4-208ENST00000500576 CHIC1Q5VXU3 224 aa27.31■■□□□ 1.96
LYRM4-208ENST00000500576 SENP3Q9H4L4 574 aaPredicted RBP24.57■■□□□ 1.52
LYRM4-208ENST00000500576 PHF23Q9BUL5 403 aaPredicted RBP24.23■■□□□ 1.47
LYRM4-208ENST00000500576 FOXD1Q16676 465 aa22.88■■□□□ 1.25
LYRM4-208ENST00000500576 PLPPR3Q6T4P5 718 aa21.82■■□□□ 1.08
LYRM4-208ENST00000500576 MSH5O43196 834 aa21.45■■□□□ 1.02
LYRM4-208ENST00000500576 PIAS4Q8N2W9 510 aaPredicted RBP21.4■■□□□ 1.02
LYRM4-208ENST00000500576 PPP6R1Q9UPN7 881 aa21.37■■□□□ 1.01
LYRM4-208ENST00000500576 ADRA2BP18089 450 aa21.31■■□□□ 1
LYRM4-208ENST00000500576 POTEDQ86YR6 584 aa20.96■□□□□ 0.95
LYRM4-208ENST00000500576 MAPK8IP2Q13387 824 aaPredicted RBP19.57■□□□□ 0.72
LYRM4-208ENST00000500576 SCAF1Q9H7N4 1312 aaKnown RBP19.52■□□□□ 0.72
LYRM4-208ENST00000500576 DMRT2Q9Y5R5 561 aa19.47■□□□□ 0.71
LYRM4-208ENST00000500576 PPP4R3CPQ6ZMV5 832 aa19.11■□□□□ 0.65
LYRM4-208ENST00000500576 CNKSR2Q8WXI2 1034 aa18.76■□□□□ 0.59
LYRM4-208ENST00000500576 HOXD11P31277 338 aaPredicted RBP18.74■□□□□ 0.59
LYRM4-208ENST00000500576 DCAF8L1A6NGE4 600 aa18.7■□□□□ 0.58
LYRM4-208ENST00000500576 RNF216Q9NWF9 866 aaPredicted RBP18.6■□□□□ 0.57
LYRM4-208ENST00000500576 CACNB1Q02641 598 aaPredicted RBP18.42■□□□□ 0.54
LYRM4-208ENST00000500576 NCBP3Q53F19 620 aaKnown RBP18.39■□□□□ 0.53
LYRM4-208ENST00000500576 RNF39Q9H2S5 420 aa18.28■□□□□ 0.52
LYRM4-208ENST00000500576 NPM3O75607 178 aaKnown RBP18.1■□□□□ 0.49
LYRM4-208ENST00000500576 DNAJC5BQ9UF47 199 aa18.09■□□□□ 0.49
LYRM4-208ENST00000500576 C1QBPQ07021 282 aaKnown RBP18.02■□□□□ 0.48
LYRM4-208ENST00000500576 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.88■□□□□ 0.45
LYRM4-208ENST00000500576 KCNA4P22459 653 aa17.74■□□□□ 0.43
LYRM4-208ENST00000500576 U3KPZ7 1027 aaPredicted RBP17.48■□□□□ 0.39
LYRM4-208ENST00000500576 SLC4A2P04920 1241 aa17.29■□□□□ 0.36
LYRM4-208ENST00000500576 SPINK5Q9NQ38 1064 aaPredicted RBP17.24■□□□□ 0.35
LYRM4-208ENST00000500576 CAPN15O75808 1086 aa17.23■□□□□ 0.35
LYRM4-208ENST00000500576 DSG3P32926 999 aa17.11■□□□□ 0.33
LYRM4-208ENST00000500576 APLP2Q06481 763 aa17.03■□□□□ 0.32
LYRM4-208ENST00000500576 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.99■□□□□ 0.31
LYRM4-208ENST00000500576 HNRNPUL2Q1KMD3 747 aaKnown RBP16.99■□□□□ 0.31
LYRM4-208ENST00000500576 TRHP20396 242 aaPredicted RBP16.95■□□□□ 0.3
LYRM4-208ENST00000500576 ZNF219Q9P2Y4 722 aaPredicted RBP16.92■□□□□ 0.3
LYRM4-208ENST00000500576 SAMD1Q6SPF0 538 aaPredicted RBP16.9■□□□□ 0.3
LYRM4-208ENST00000500576 ABCB7O75027 752 aa16.83■□□□□ 0.28
LYRM4-208ENST00000500576 MYCNP04198 464 aaPredicted RBP16.77■□□□□ 0.28
LYRM4-208ENST00000500576 SLC4A1APQ9BWU0 796 aaKnown RBP16.76■□□□□ 0.27
LYRM4-208ENST00000500576 FOXD4L1Q9NU39 408 aa16.58■□□□□ 0.24
LYRM4-208ENST00000500576 POLA2Q14181 598 aa16.47■□□□□ 0.23
LYRM4-208ENST00000500576 POTEHQ6S545 545 aa16.43■□□□□ 0.22
LYRM4-208ENST00000500576 RBM42Q9BTD8 480 aaKnown RBP16.36■□□□□ 0.21
LYRM4-208ENST00000500576 ATF5Q9Y2D1 282 aaPredicted RBP16.36■□□□□ 0.21
LYRM4-208ENST00000500576 ZBTB22O15209 634 aa16.3■□□□□ 0.2
LYRM4-208ENST00000500576 ZBTB12Q9Y330 459 aaPredicted RBP16.16■□□□□ 0.18
LYRM4-208ENST00000500576 ATXN8OSP0DMR3 200 aa16.06■□□□□ 0.16
LYRM4-208ENST00000500576 CHRDL2Q6WN34 429 aa16■□□□□ 0.15
LYRM4-208ENST00000500576 OSCARQ8IYS5 282 aa15.97■□□□□ 0.15
LYRM4-208ENST00000500576 AKT1S1Q96B36 256 aa15.96■□□□□ 0.15
LYRM4-208ENST00000500576 REM2Q8IYK8 340 aaPredicted RBP15.8■□□□□ 0.12
LYRM4-208ENST00000500576 FBLN2P98095 1184 aa15.76■□□□□ 0.11
LYRM4-208ENST00000500576 SPDYE2BA6NHP3 402 aa15.65■□□□□ 0.1
LYRM4-208ENST00000500576 SPDYE6P0CI01 402 aa15.65■□□□□ 0.1
LYRM4-208ENST00000500576 SPDYE2Q495Y8 402 aa15.65■□□□□ 0.1
LYRM4-208ENST00000500576 PITPNM1O00562 1244 aa15.64■□□□□ 0.09
LYRM4-208ENST00000500576 MKRN4PQ13434 485 aaPredicted RBP15.6■□□□□ 0.09
LYRM4-208ENST00000500576 PIP4P2Q8N4L2 257 aa15.6■□□□□ 0.09
LYRM4-208ENST00000500576 CSRNP3Q8WYN3 585 aa15.52■□□□□ 0.08
LYRM4-208ENST00000500576 FXR2P51116 673 aaKnown RBP eCLIP15.5■□□□□ 0.07
LYRM4-208ENST00000500576 ZNF692Q9BU19 519 aaPredicted RBP15.45■□□□□ 0.06
LYRM4-208ENST00000500576 SSUH2Q9Y2M2 353 aa15.43■□□□□ 0.06
LYRM4-208ENST00000500576 SPDYE1Q8NFV5 336 aaPredicted RBP15.39■□□□□ 0.05
LYRM4-208ENST00000500576 SP7Q8TDD2 431 aaPredicted RBP15.39■□□□□ 0.05
LYRM4-208ENST00000500576 CLEC11AQ9Y240 323 aa15.36■□□□□ 0.05
LYRM4-208ENST00000500576 EHMT2Q96KQ7 1210 aa15.35■□□□□ 0.05
LYRM4-208ENST00000500576 HAX1O00165 279 aa15.34■□□□□ 0.05
LYRM4-208ENST00000500576 PRKAR2AP13861 404 aaKnown RBP15.24■□□□□ 0.03
LYRM4-208ENST00000500576 PABPN1Q86U42 306 aaKnown RBP eCLIP15.23■□□□□ 0.03
LYRM4-208ENST00000500576 EVX2Q03828 476 aa15.11■□□□□ 0.01
LYRM4-208ENST00000500576 PRR29P0C7W0 189 aa15.1■□□□□ 0.01
LYRM4-208ENST00000500576 CHADLQ6NUI6 762 aa15.06■□□□□ 0
LYRM4-208ENST00000500576 C19orf67A6NJJ6 358 aa15□□□□□ -0.01
LYRM4-208ENST00000500576 SPDYE4A6NLX3 237 aa14.87□□□□□ -0.03
LYRM4-208ENST00000500576 FARP1Q9Y4F1 1045 aaPredicted RBP14.83□□□□□ -0.04
LYRM4-208ENST00000500576 STAG3Q9UJ98 1225 aa14.81□□□□□ -0.04
LYRM4-208ENST00000500576 GABBR2O75899 941 aa14.79□□□□□ -0.04
LYRM4-208ENST00000500576 CD44P16070 742 aaKnown RBP14.76□□□□□ -0.05
LYRM4-208ENST00000500576 CREBZFQ9NS37 354 aa14.71□□□□□ -0.05
LYRM4-208ENST00000500576 CLCN6P51797 869 aa14.56□□□□□ -0.08
LYRM4-208ENST00000500576 ZRANB1Q9UGI0 708 aa14.55□□□□□ -0.08
LYRM4-208ENST00000500576 ZNF579Q8NAF0 562 aaKnown RBP14.53□□□□□ -0.08
LYRM4-208ENST00000500576 PROM2Q8N271 834 aa14.5□□□□□ -0.09
LYRM4-208ENST00000500576 NPM1P06748 294 aaKnown RBP eCLIP14.46□□□□□ -0.09
LYRM4-208ENST00000500576 POTEIP0CG38 1075 aa14.46□□□□□ -0.09
LYRM4-208ENST00000500576 PAK3O75914 559 aaPredicted RBP14.45□□□□□ -0.1
LYRM4-208ENST00000500576 MNX1P50219 401 aaPredicted RBP14.44□□□□□ -0.1
LYRM4-208ENST00000500576 LHX8Q68G74 356 aa14.43□□□□□ -0.1
LYRM4-208ENST00000500576 DCBLD2Q96PD2 775 aa14.41□□□□□ -0.1
LYRM4-208ENST00000500576 GALR2O43603 387 aaPredicted RBP14.35□□□□□ -0.11
LYRM4-208ENST00000500576 PHF12Q96QT6 1004 aa14.34□□□□□ -0.11
LYRM4-208ENST00000500576 PLEKHG5O94827 1062 aa14.21□□□□□ -0.13
LYRM4-208ENST00000500576 MIER1Q8N108 512 aa14.2□□□□□ -0.14
LYRM4-208ENST00000500576 TSPYL2Q9H2G4 693 aaPredicted RBP14.19□□□□□ -0.14
LYRM4-208ENST00000500576 MS4A3Q96HJ5 214 aa14.15□□□□□ -0.14
LYRM4-208ENST00000500576 FKBP8Q14318 412 aa14.11□□□□□ -0.15
LYRM4-208ENST00000500576 CCDC61Q9Y6R9 512 aa14.11□□□□□ -0.15
LYRM4-208ENST00000500576 PLCD3Q8N3E9 789 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms