Protein–RNA interactions for Protein: P48743

RFX1, RFX-like DNA-binding protein RFX1, yeastyeast

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFX1P48743 SDH2YLL041C 801 nt2.44□□□□□ -2.02
RFX1P48743 SCD5YOR329C 2619 nt2.44□□□□□ -2.02
RFX1P48743 SGS1YMR190C 4344 nt2.44□□□□□ -2.02
RFX1P48743 YBR184WYBR184W 1572 nt2.44□□□□□ -2.02
RFX1P48743 HDA3YPR179C 1968 nt2.43□□□□□ -2.02
RFX1P48743 SNF5YBR289W 2718 nt2.43□□□□□ -2.02
RFX1P48743 Q0032Q0032 291 nt2.43□□□□□ -2.02
RFX1P48743 YML007C-AYML007C-A 111 nt2.43□□□□□ -2.02
RFX1P48743 IRA2YOL081W 9240 nt2.43□□□□□ -2.02
RFX1P48743 SEF1YBL066C 3447 nt2.43□□□□□ -2.02
RFX1P48743 AFI1YOR129C 2682 nt2.43□□□□□ -2.02
RFX1P48743 MCD1YDL003W 1701 nt2.42□□□□□ -2.02
RFX1P48743 RRP6YOR001W 2202 nt2.42□□□□□ -2.02
RFX1P48743 AMS1YGL156W 3252 nt2.42□□□□□ -2.02
RFX1P48743 CRM1YGR218W 3255 nt2.42□□□□□ -2.02
RFX1P48743 ABF2YMR072W 552 nt2.42□□□□□ -2.02
RFX1P48743 YOL155W-AYOL155W-A 135 nt2.42□□□□□ -2.02
RFX1P48743 YBR224WYBR224W 516 nt2.42□□□□□ -2.02
RFX1P48743 VPH1YOR270C 2523 nt2.42□□□□□ -2.02
RFX1P48743 UBP15YMR304W 3693 nt2.42□□□□□ -2.02
RFX1P48743 HOS4YIL112W 3252 nt2.41□□□□□ -2.02
RFX1P48743 TOP2YNL088W 4287 nt2.41□□□□□ -2.02
RFX1P48743 PEP3YLR148W 2757 nt2.41□□□□□ -2.02
RFX1P48743 MMS22YLR320W 4365 nt2.41□□□□□ -2.02
RFX1P48743 INP51YIL002C 2841 nt2.41□□□□□ -2.02
RFX1P48743 YGR050CYGR050C 357 nt2.41□□□□□ -2.02
RFX1P48743 YPR063CYPR063C 423 nt2.41□□□□□ -2.02
RFX1P48743 NUT2YPR168W 474 nt2.41□□□□□ -2.02
RFX1P48743 YLR149CYLR149C 2193 nt2.41□□□□□ -2.02
RFX1P48743 HCS1YKL017C 2052 nt2.41□□□□□ -2.02
RFX1P48743 VTC3YPL019C 2508 nt2.41□□□□□ -2.02
RFX1P48743 ISW1YBR245C 3390 nt2.41□□□□□ -2.02
RFX1P48743 CDC27YBL084C 2277 nt2.4□□□□□ -2.02
RFX1P48743 EFR3YMR212C 2349 nt2.4□□□□□ -2.02
RFX1P48743 SCP160YJL080C 3669 nt2.4□□□□□ -2.03
RFX1P48743 YOR333CYOR333C 417 nt2.4□□□□□ -2.03
RFX1P48743 SMY2YBR172C 2223 nt2.4□□□□□ -2.03
RFX1P48743 YBL005W-BYBL005W-B 5268 nt2.39□□□□□ -2.03
RFX1P48743 YEL043WYEL043W 2871 nt2.39□□□□□ -2.03
RFX1P48743 YGL007C-AYGL007C-A 87 nt2.39□□□□□ -2.03
RFX1P48743 YGL041CYGL041C 204 nt2.39□□□□□ -2.03
RFX1P48743 SNC1YAL030W 354 nt2.39□□□□□ -2.03
RFX1P48743 YBR064WYBR064W 429 nt2.39□□□□□ -2.03
RFX1P48743 SGM1YJR134C 2124 nt2.39□□□□□ -2.03
RFX1P48743 YKU80YMR106C 1890 nt2.39□□□□□ -2.03
RFX1P48743 NAB6YML117W 3405 nt2.39□□□□□ -2.03
RFX1P48743 YDR426CYDR426C 378 nt2.38□□□□□ -2.03
RFX1P48743 YGR250CYGR250C 2346 nt2.38□□□□□ -2.03
RFX1P48743 SCH9YHR205W 2475 nt2.38□□□□□ -2.03
RFX1P48743 ACM1YPL267W 630 nt2.38□□□□□ -2.03
RFX1P48743 GIS1YDR096W 2685 nt2.38□□□□□ -2.03
RFX1P48743 CBF2YGR140W 2871 nt2.38□□□□□ -2.03
RFX1P48743 HSC82YMR186W 2118 nt2.38□□□□□ -2.03
RFX1P48743 VPS34YLR240W 2628 nt2.38□□□□□ -2.03
RFX1P48743 CSF1YLR087C 8877 nt2.37□□□□□ -2.03
RFX1P48743 SPO22YIL073C 2928 nt2.37□□□□□ -2.03
RFX1P48743 YEF3YLR249W 3135 nt2.37□□□□□ -2.03
RFX1P48743 YOL098CYOL098C 3114 nt2.37□□□□□ -2.03
RFX1P48743 YLR146W-AYLR146W-A 189 nt2.37□□□□□ -2.03
RFX1P48743 UPS1YLR193C 528 nt2.37□□□□□ -2.03
RFX1P48743 YMR307C-AYMR307C-A 195 nt2.37□□□□□ -2.03
RFX1P48743 MNL2YLR057W 2550 nt2.37□□□□□ -2.03
RFX1P48743 GRR1YJR090C 3456 nt2.36□□□□□ -2.03
RFX1P48743 APL5YPL195W 2799 nt2.36□□□□□ -2.03
RFX1P48743 snR60snR60 104 nt2.36□□□□□ -2.03
RFX1P48743 COS111YBR203W 2775 nt2.36□□□□□ -2.03
RFX1P48743 YNL018CYNL018C 1839 nt2.35□□□□□ -2.03
RFX1P48743 FAR11YNL127W 2862 nt2.35□□□□□ -2.03
RFX1P48743 CDC53YDL132W 2448 nt2.35□□□□□ -2.03
RFX1P48743 snR55snR55 98 nt2.35□□□□□ -2.03
RFX1P48743 TRX1YLR043C 312 nt2.35□□□□□ -2.03
RFX1P48743 YLR255CYLR255C 354 nt2.35□□□□□ -2.03
RFX1P48743 CYB5YNL111C 363 nt2.35□□□□□ -2.03
RFX1P48743 YPR002C-AYPR002C-A 198 nt2.35□□□□□ -2.03
RFX1P48743 MVP1YMR004W 1536 nt2.35□□□□□ -2.03
RFX1P48743 PSD2YGR170W 3417 nt2.35□□□□□ -2.03
RFX1P48743 SWA2YDR320C 2007 nt2.35□□□□□ -2.03
RFX1P48743 SCW11YGL028C 1629 nt2.35□□□□□ -2.03
RFX1P48743 NOP53YPL146C 1368 nt2.35□□□□□ -2.03
RFX1P48743 ORC2YBR060C 1863 nt2.35□□□□□ -2.03
RFX1P48743 CFT2YLR115W 2580 nt2.34□□□□□ -2.03
RFX1P48743 STB4YMR019W 2850 nt2.34□□□□□ -2.03
RFX1P48743 SIR3YLR442C 2937 nt2.34□□□□□ -2.03
RFX1P48743 APQ12YIL040W 417 nt2.34□□□□□ -2.03
RFX1P48743 RPS29AYLR388W 171 nt2.34□□□□□ -2.03
RFX1P48743 SAP190YKR028W 3102 nt2.33□□□□□ -2.04
RFX1P48743 YCK3YER123W 1575 nt2.33□□□□□ -2.04
RFX1P48743 NUP170YBL079W 4509 nt2.33□□□□□ -2.04
RFX1P48743 YMR230W-AYMR230W-A 189 nt2.33□□□□□ -2.04
RFX1P48743 YNL114CYNL114C 372 nt2.33□□□□□ -2.04
RFX1P48743 DNF1YER166W 4716 nt2.33□□□□□ -2.04
RFX1P48743 IRC8YJL051W 2469 nt2.33□□□□□ -2.04
RFX1P48743 PXA2YKL188C 2562 nt2.33□□□□□ -2.04
RFX1P48743 SWI6YLR182W 2412 nt2.32□□□□□ -2.04
RFX1P48743 RPL42BYHR141C 321 nt2.32□□□□□ -2.04
RFX1P48743 RPL42AYNL162W 321 nt2.32□□□□□ -2.04
RFX1P48743 YBL083CYBL083C 426 nt2.32□□□□□ -2.04
RFX1P48743 KRE33YNL132W 3171 nt2.31□□□□□ -2.04
RFX1P48743 MGM1YOR211C 2646 nt2.31□□□□□ -2.04
RFX1P48743 SEC16YPL085W 6588 nt2.31□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 48.2 ms