Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CKS2P33552 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CKS2P33552 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CKS2P33552 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CKS2P33552 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CKS2P33552 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.86□□□□□ -0.03
CKS2P33552 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CKS2P33552 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CKS2P33552 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CKS2P33552 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CKS2P33552 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CKS2P33552 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CKS2P33552 AC125437.2-201ENST00000625180 2167 ntBASIC14.86□□□□□ -0.03
CKS2P33552 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CKS2P33552 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CKS2P33552 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CKS2P33552 AC010525.1-201ENST00000585559 441 ntBASIC14.86□□□□□ -0.03
CKS2P33552 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CKS2P33552 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14.86□□□□□ -0.03
CKS2P33552 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CKS2P33552 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.86□□□□□ -0.03
CKS2P33552 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CKS2P33552 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CKS2P33552 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CKS2P33552 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CKS2P33552 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CKS2P33552 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.85□□□□□ -0.03
CKS2P33552 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CKS2P33552 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CKS2P33552 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CKS2P33552 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CKS2P33552 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CKS2P33552 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.85□□□□□ -0.03
CKS2P33552 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.85□□□□□ -0.03
CKS2P33552 LSM4-201ENST00000252816 986 ntTSL 2 BASIC14.85□□□□□ -0.03
CKS2P33552 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.85□□□□□ -0.03
CKS2P33552 MIR4787-201ENST00000607364 84 ntBASIC14.85□□□□□ -0.03
CKS2P33552 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC14.85□□□□□ -0.03
CKS2P33552 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CKS2P33552 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CKS2P33552 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CKS2P33552 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CKS2P33552 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CKS2P33552 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.85□□□□□ -0.03
CKS2P33552 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.85□□□□□ -0.03
CKS2P33552 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CKS2P33552 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CKS2P33552 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CKS2P33552 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CKS2P33552 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CKS2P33552 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.85□□□□□ -0.03
CKS2P33552 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.85□□□□□ -0.03
CKS2P33552 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CKS2P33552 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CKS2P33552 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CKS2P33552 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CKS2P33552 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CKS2P33552 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CKS2P33552 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CKS2P33552 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CKS2P33552 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CKS2P33552 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CKS2P33552 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.84□□□□□ -0.03
CKS2P33552 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.84□□□□□ -0.03
CKS2P33552 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CKS2P33552 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
CKS2P33552 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CKS2P33552 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CKS2P33552 TSPY9P-201ENST00000440215 945 ntBASIC14.84□□□□□ -0.03
CKS2P33552 TSPY11P-201ENST00000442607 1045 ntBASIC14.84□□□□□ -0.03
CKS2P33552 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CKS2P33552 BRD4-212ENST00000630599 726 ntTSL 2 BASIC14.84□□□□□ -0.03
CKS2P33552 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CKS2P33552 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CKS2P33552 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC14.84□□□□□ -0.03
CKS2P33552 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CKS2P33552 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CKS2P33552 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CKS2P33552 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.84□□□□□ -0.03
CKS2P33552 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CKS2P33552 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CKS2P33552 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CKS2P33552 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.84□□□□□ -0.03
CKS2P33552 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CKS2P33552 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CKS2P33552 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CKS2P33552 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CKS2P33552 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.84□□□□□ -0.03
CKS2P33552 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CKS2P33552 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CKS2P33552 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CKS2P33552 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
CKS2P33552 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CKS2P33552 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CKS2P33552 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CKS2P33552 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CKS2P33552 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.83□□□□□ -0.04
CKS2P33552 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CKS2P33552 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC14.83□□□□□ -0.04
CKS2P33552 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms