Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CTSDP07339 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
CTSDP07339 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CTSDP07339 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSDP07339 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CTSDP07339 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTSDP07339 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSDP07339 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSDP07339 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.76■□□□□ 0.27
CTSDP07339 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSDP07339 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSDP07339 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSDP07339 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CTSDP07339 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.76■□□□□ 0.27
CTSDP07339 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTSDP07339 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.76■□□□□ 0.27
CTSDP07339 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.76■□□□□ 0.27
CTSDP07339 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.76■□□□□ 0.27
CTSDP07339 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.76■□□□□ 0.27
CTSDP07339 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTSDP07339 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSDP07339 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.76■□□□□ 0.27
CTSDP07339 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.76■□□□□ 0.27
CTSDP07339 AC116050.2-201ENST00000612102 1779 ntBASIC16.76■□□□□ 0.27
CTSDP07339 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CTSDP07339 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSDP07339 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTSDP07339 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSDP07339 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTSDP07339 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSDP07339 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSDP07339 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.76■□□□□ 0.27
CTSDP07339 AL691432.2-201ENST00000607222 2038 ntBASIC16.75■□□□□ 0.27
CTSDP07339 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSDP07339 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.75■□□□□ 0.27
CTSDP07339 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSDP07339 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.75■□□□□ 0.27
CTSDP07339 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.75■□□□□ 0.27
CTSDP07339 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSDP07339 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTSDP07339 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSDP07339 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTSDP07339 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.75■□□□□ 0.27
CTSDP07339 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.75■□□□□ 0.27
CTSDP07339 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.75■□□□□ 0.27
CTSDP07339 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CTSDP07339 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTSDP07339 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CTSDP07339 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.75■□□□□ 0.27
CTSDP07339 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.75■□□□□ 0.27
CTSDP07339 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.75■□□□□ 0.27
CTSDP07339 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTSDP07339 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSDP07339 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.75■□□□□ 0.27
CTSDP07339 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSDP07339 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSDP07339 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSDP07339 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.74■□□□□ 0.27
CTSDP07339 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTSDP07339 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSDP07339 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSDP07339 BX119927.1-201ENST00000636596 1552 ntBASIC16.74■□□□□ 0.27
CTSDP07339 KRT16P2-201ENST00000414673 1423 ntBASIC16.74■□□□□ 0.27
CTSDP07339 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTSDP07339 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.74■□□□□ 0.27
CTSDP07339 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSDP07339 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSDP07339 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTSDP07339 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CTSDP07339 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSDP07339 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CTSDP07339 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSDP07339 DPP3P2-201ENST00000416030 1696 ntBASIC16.74■□□□□ 0.27
CTSDP07339 AC004408.2-201ENST00000623613 2777 ntBASIC16.74■□□□□ 0.27
CTSDP07339 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTSDP07339 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.74■□□□□ 0.27
CTSDP07339 TREX1-205ENST00000625293 1783 ntBASIC16.74■□□□□ 0.27
CTSDP07339 AC093484.2-201ENST00000580996 2166 ntBASIC16.74■□□□□ 0.27
CTSDP07339 TSPY26P-201ENST00000476365 1326 ntBASIC16.73■□□□□ 0.27
CTSDP07339 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSDP07339 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSDP07339 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
CTSDP07339 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTSDP07339 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.73■□□□□ 0.27
CTSDP07339 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSDP07339 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.73■□□□□ 0.27
CTSDP07339 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSDP07339 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.73■□□□□ 0.27
CTSDP07339 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSDP07339 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CTSDP07339 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSDP07339 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.73■□□□□ 0.27
CTSDP07339 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSDP07339 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSDP07339 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.73■□□□□ 0.27
CTSDP07339 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CTSDP07339 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSDP07339 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSDP07339 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTSDP07339 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms