Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFA1O15239 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
NDUFA1O15239 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.81□□□□□ -0.2
NDUFA1O15239 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFA1O15239 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFA1O15239 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
NDUFA1O15239 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFA1O15239 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFA1O15239 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFA1O15239 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFA1O15239 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFA1O15239 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
NDUFA1O15239 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFA1O15239 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC13.81□□□□□ -0.2
NDUFA1O15239 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC13.81□□□□□ -0.2
NDUFA1O15239 AC099791.1-201ENST00000416440 715 ntBASIC13.81□□□□□ -0.2
NDUFA1O15239 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
NDUFA1O15239 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC13.81□□□□□ -0.2
NDUFA1O15239 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFA1O15239 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFA1O15239 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFA1O15239 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFA1O15239 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFA1O15239 TSPY26P-201ENST00000476365 1326 ntBASIC13.81□□□□□ -0.2
NDUFA1O15239 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFA1O15239 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFA1O15239 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFA1O15239 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC13.81□□□□□ -0.2
NDUFA1O15239 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFA1O15239 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFA1O15239 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
NDUFA1O15239 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFA1O15239 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFA1O15239 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFA1O15239 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFA1O15239 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC13.8□□□□□ -0.2
NDUFA1O15239 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFA1O15239 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFA1O15239 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFA1O15239 AL158211.5-201ENST00000623583 2518 ntBASIC13.8□□□□□ -0.2
NDUFA1O15239 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
NDUFA1O15239 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFA1O15239 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFA1O15239 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC13.8□□□□□ -0.2
NDUFA1O15239 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC13.8□□□□□ -0.2
NDUFA1O15239 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFA1O15239 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFA1O15239 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NDUFA1O15239 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFA1O15239 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFA1O15239 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFA1O15239 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.8□□□□□ -0.2
NDUFA1O15239 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFA1O15239 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFA1O15239 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC13.8□□□□□ -0.2
NDUFA1O15239 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NDUFA1O15239 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
NDUFA1O15239 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFA1O15239 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFA1O15239 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFA1O15239 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFA1O15239 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NDUFA1O15239 AC125437.2-201ENST00000625180 2167 ntBASIC13.79□□□□□ -0.2
NDUFA1O15239 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.79□□□□□ -0.2
NDUFA1O15239 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFA1O15239 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFA1O15239 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFA1O15239 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFA1O15239 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC13.79□□□□□ -0.2
NDUFA1O15239 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFA1O15239 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFA1O15239 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC13.79□□□□□ -0.2
NDUFA1O15239 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
NDUFA1O15239 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC13.79□□□□□ -0.2
NDUFA1O15239 PBX2P1-201ENST00000493219 1291 ntBASIC13.79□□□□□ -0.2
NDUFA1O15239 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC13.79□□□□□ -0.2
NDUFA1O15239 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NDUFA1O15239 GRAMD4P4-201ENST00000613563 1115 ntBASIC13.79□□□□□ -0.2
NDUFA1O15239 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC13.79□□□□□ -0.2
NDUFA1O15239 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFA1O15239 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFA1O15239 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFA1O15239 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC13.79□□□□□ -0.2
NDUFA1O15239 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFA1O15239 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFA1O15239 BX005040.4-201ENST00000637145 1518 ntBASIC13.79□□□□□ -0.2
NDUFA1O15239 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFA1O15239 AC005224.4-201ENST00000583262 1652 ntBASIC13.79□□□□□ -0.2
NDUFA1O15239 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFA1O15239 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NDUFA1O15239 PXK-203ENST00000383715 1756 ntTSL 5 BASIC13.78□□□□□ -0.2
NDUFA1O15239 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFA1O15239 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFA1O15239 AC004408.2-201ENST00000623613 2777 ntBASIC13.78□□□□□ -0.2
NDUFA1O15239 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
NDUFA1O15239 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFA1O15239 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFA1O15239 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFA1O15239 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFA1O15239 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms