Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV5A0A0B4J249 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV5A0A0B4J249 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV5A0A0B4J249 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV5A0A0B4J249 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRAV5A0A0B4J249 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV5A0A0B4J249 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV5A0A0B4J249 AC245052.3-201ENST00000450182 901 ntBASIC15.69■□□□□ 0.1
TRAV5A0A0B4J249 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV5A0A0B4J249 AC012414.1-201ENST00000556676 535 ntBASIC15.69■□□□□ 0.1
TRAV5A0A0B4J249 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC15.69■□□□□ 0.1
TRAV5A0A0B4J249 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV5A0A0B4J249 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV5A0A0B4J249 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV5A0A0B4J249 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV5A0A0B4J249 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV5A0A0B4J249 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRAV5A0A0B4J249 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV5A0A0B4J249 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV5A0A0B4J249 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV5A0A0B4J249 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV5A0A0B4J249 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRAV5A0A0B4J249 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV5A0A0B4J249 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV5A0A0B4J249 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV5A0A0B4J249 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV5A0A0B4J249 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV5A0A0B4J249 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV5A0A0B4J249 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.68■□□□□ 0.1
TRAV5A0A0B4J249 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV5A0A0B4J249 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV5A0A0B4J249 TPRG1LP1-201ENST00000598702 760 ntBASIC15.68■□□□□ 0.1
TRAV5A0A0B4J249 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV5A0A0B4J249 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV5A0A0B4J249 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV5A0A0B4J249 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TRAV5A0A0B4J249 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV5A0A0B4J249 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV5A0A0B4J249 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV5A0A0B4J249 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV5A0A0B4J249 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV5A0A0B4J249 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV5A0A0B4J249 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV5A0A0B4J249 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV5A0A0B4J249 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRAV5A0A0B4J249 RASA4CP-201ENST00000424092 1398 ntBASIC15.67■□□□□ 0.1
TRAV5A0A0B4J249 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV5A0A0B4J249 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV5A0A0B4J249 NT5C3AP1-201ENST00000394500 1012 ntBASIC15.67■□□□□ 0.1
TRAV5A0A0B4J249 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV5A0A0B4J249 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV5A0A0B4J249 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV5A0A0B4J249 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV5A0A0B4J249 CPT2-209ENST00000636935 803 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV5A0A0B4J249 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV5A0A0B4J249 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV5A0A0B4J249 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV5A0A0B4J249 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV5A0A0B4J249 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV5A0A0B4J249 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV5A0A0B4J249 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 EBPL-204ENST00000378272 766 ntTSL 3 BASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 AC079140.4-201ENST00000507448 529 ntBASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 AF213884.3-201ENST00000563833 479 ntBASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 AC106739.1-201ENST00000617035 715 ntBASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 AC116050.2-201ENST00000612102 1779 ntBASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV5A0A0B4J249 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
TRAV5A0A0B4J249 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRAV5A0A0B4J249 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
TRAV5A0A0B4J249 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV5A0A0B4J249 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
TRAV5A0A0B4J249 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV5A0A0B4J249 AL691432.2-201ENST00000607222 2038 ntBASIC15.65■□□□□ 0.1
TRAV5A0A0B4J249 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV5A0A0B4J249 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV5A0A0B4J249 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV5A0A0B4J249 DPP3P2-201ENST00000416030 1696 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms