Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV6A0A075B6T7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV6A0A075B6T7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAV6A0A075B6T7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAV6A0A075B6T7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAV6A0A075B6T7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAV6A0A075B6T7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV6A0A075B6T7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRAV6A0A075B6T7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TRAV6A0A075B6T7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV6A0A075B6T7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAV6A0A075B6T7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAV6A0A075B6T7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.31■□□□□ 0.36
TRAV6A0A075B6T7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV6A0A075B6T7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAV6A0A075B6T7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRAV6A0A075B6T7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAV6A0A075B6T7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRAV6A0A075B6T7 AC137630.3-201ENST00000607245 391 ntBASIC17.31■□□□□ 0.36
TRAV6A0A075B6T7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRAV6A0A075B6T7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAV6A0A075B6T7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV6A0A075B6T7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRAV6A0A075B6T7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRAV6A0A075B6T7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV6A0A075B6T7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV6A0A075B6T7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV6A0A075B6T7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAV6A0A075B6T7 AL049812.1-201ENST00000432563 2267 ntBASIC17.31■□□□□ 0.36
TRAV6A0A075B6T7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRAV6A0A075B6T7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRAV6A0A075B6T7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV6A0A075B6T7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV6A0A075B6T7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRAV6A0A075B6T7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV6A0A075B6T7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV6A0A075B6T7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV6A0A075B6T7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV6A0A075B6T7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV6A0A075B6T7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.3■□□□□ 0.36
TRAV6A0A075B6T7 AC074183.2-201ENST00000623112 922 ntBASIC17.3■□□□□ 0.36
TRAV6A0A075B6T7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TRAV6A0A075B6T7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV6A0A075B6T7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV6A0A075B6T7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV6A0A075B6T7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 MIR4449-201ENST00000578365 66 ntBASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 AC010980.1-201ENST00000587192 1142 ntBASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV6A0A075B6T7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 ABHD17AP3-201ENST00000503096 1137 ntBASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
TRAV6A0A075B6T7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms