Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 AC009237.3-201ENST00000393279 1427 ntBASIC19.12■□□□□ 0.65
AP4S1Q9Y587 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 SLC47A1P1-202ENST00000449666 945 ntBASIC19.12■□□□□ 0.65
AP4S1Q9Y587 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AP4S1Q9Y587 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP4S1Q9Y587 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP4S1Q9Y587 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.11■□□□□ 0.65
AP4S1Q9Y587 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.11■□□□□ 0.65
AP4S1Q9Y587 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
AP4S1Q9Y587 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AP4S1Q9Y587 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AP4S1Q9Y587 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP4S1Q9Y587 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP4S1Q9Y587 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.11■□□□□ 0.65
AP4S1Q9Y587 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
AP4S1Q9Y587 UNC93B8-201ENST00000511903 705 ntBASIC19.11■□□□□ 0.65
AP4S1Q9Y587 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP4S1Q9Y587 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP4S1Q9Y587 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP4S1Q9Y587 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP4S1Q9Y587 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP4S1Q9Y587 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP4S1Q9Y587 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AP4S1Q9Y587 AC026471.1-201ENST00000564629 3026 ntBASIC19.11■□□□□ 0.65
AP4S1Q9Y587 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP4S1Q9Y587 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP4S1Q9Y587 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AP4S1Q9Y587 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
AP4S1Q9Y587 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP4S1Q9Y587 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
AP4S1Q9Y587 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP4S1Q9Y587 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.1■□□□□ 0.65
AP4S1Q9Y587 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
AP4S1Q9Y587 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.1■□□□□ 0.65
AP4S1Q9Y587 SRD5A1P1-201ENST00000442297 786 ntBASIC19.1■□□□□ 0.65
AP4S1Q9Y587 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.1■□□□□ 0.65
AP4S1Q9Y587 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP4S1Q9Y587 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP4S1Q9Y587 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.1■□□□□ 0.65
AP4S1Q9Y587 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP4S1Q9Y587 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP4S1Q9Y587 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 AC093503.3-201ENST00000624917 2352 ntBASIC19.09■□□□□ 0.65
AP4S1Q9Y587 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
AP4S1Q9Y587 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.08■□□□□ 0.65
AP4S1Q9Y587 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
AP4S1Q9Y587 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.08■□□□□ 0.65
AP4S1Q9Y587 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP4S1Q9Y587 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP4S1Q9Y587 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.08■□□□□ 0.65
AP4S1Q9Y587 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.08■□□□□ 0.65
AP4S1Q9Y587 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP4S1Q9Y587 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
AP4S1Q9Y587 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms