Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.08■□□□□ 0.65
NR1H4Q96RI1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
NR1H4Q96RI1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
NR1H4Q96RI1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
NR1H4Q96RI1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NR1H4Q96RI1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NR1H4Q96RI1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
NR1H4Q96RI1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NR1H4Q96RI1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.08■□□□□ 0.64
NR1H4Q96RI1 AC103724.3-201ENST00000564481 992 ntBASIC19.08■□□□□ 0.64
NR1H4Q96RI1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.08■□□□□ 0.64
NR1H4Q96RI1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
NR1H4Q96RI1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.08■□□□□ 0.64
NR1H4Q96RI1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NR1H4Q96RI1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NR1H4Q96RI1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NR1H4Q96RI1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.08■□□□□ 0.64
NR1H4Q96RI1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.08■□□□□ 0.64
NR1H4Q96RI1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.08■□□□□ 0.64
NR1H4Q96RI1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.08■□□□□ 0.64
NR1H4Q96RI1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NR1H4Q96RI1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.08■□□□□ 0.64
NR1H4Q96RI1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H4Q96RI1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NR1H4Q96RI1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NR1H4Q96RI1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.06■□□□□ 0.64
NR1H4Q96RI1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NR1H4Q96RI1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.06■□□□□ 0.64
NR1H4Q96RI1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NR1H4Q96RI1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
NR1H4Q96RI1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NR1H4Q96RI1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NR1H4Q96RI1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.06■□□□□ 0.64
NR1H4Q96RI1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NR1H4Q96RI1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.06■□□□□ 0.64
NR1H4Q96RI1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
NR1H4Q96RI1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
NR1H4Q96RI1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NR1H4Q96RI1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.06■□□□□ 0.64
NR1H4Q96RI1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.06■□□□□ 0.64
NR1H4Q96RI1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.06■□□□□ 0.64
NR1H4Q96RI1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NR1H4Q96RI1 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NR1H4Q96RI1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
NR1H4Q96RI1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
NR1H4Q96RI1 AC092720.2-201ENST00000602388 1665 ntBASIC19.05■□□□□ 0.64
NR1H4Q96RI1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NR1H4Q96RI1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NR1H4Q96RI1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.05■□□□□ 0.64
NR1H4Q96RI1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
NR1H4Q96RI1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
NR1H4Q96RI1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.05■□□□□ 0.64
NR1H4Q96RI1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NR1H4Q96RI1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
NR1H4Q96RI1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
NR1H4Q96RI1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.05■□□□□ 0.64
NR1H4Q96RI1 PCDHB18P-201ENST00000524813 2368 ntBASIC19.05■□□□□ 0.64
NR1H4Q96RI1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NR1H4Q96RI1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NR1H4Q96RI1 AP000997.3-201ENST00000623333 2250 ntBASIC19.04■□□□□ 0.64
NR1H4Q96RI1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
NR1H4Q96RI1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.04■□□□□ 0.64
NR1H4Q96RI1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.04■□□□□ 0.64
NR1H4Q96RI1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NR1H4Q96RI1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.04■□□□□ 0.64
NR1H4Q96RI1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.04■□□□□ 0.64
NR1H4Q96RI1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
NR1H4Q96RI1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
NR1H4Q96RI1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NR1H4Q96RI1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NR1H4Q96RI1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NR1H4Q96RI1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NR1H4Q96RI1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NR1H4Q96RI1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms