Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST3H2BBQ8N257 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST3H2BBQ8N257 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST3H2BBQ8N257 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST3H2BBQ8N257 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST3H2BBQ8N257 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.19■□□□□ 0.02
HIST3H2BBQ8N257 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST3H2BBQ8N257 AL354751.1-201ENST00000412768 1863 ntBASIC15.19■□□□□ 0.02
HIST3H2BBQ8N257 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST3H2BBQ8N257 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST3H2BBQ8N257 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
HIST3H2BBQ8N257 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST3H2BBQ8N257 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
HIST3H2BBQ8N257 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST3H2BBQ8N257 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.19■□□□□ 0.02
HIST3H2BBQ8N257 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST3H2BBQ8N257 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST3H2BBQ8N257 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HIST3H2BBQ8N257 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST3H2BBQ8N257 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST3H2BBQ8N257 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST3H2BBQ8N257 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIST3H2BBQ8N257 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST3H2BBQ8N257 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.18■□□□□ 0.02
HIST3H2BBQ8N257 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST3H2BBQ8N257 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST3H2BBQ8N257 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.18■□□□□ 0.02
HIST3H2BBQ8N257 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST3H2BBQ8N257 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
HIST3H2BBQ8N257 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST3H2BBQ8N257 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC15.18■□□□□ 0.02
HIST3H2BBQ8N257 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.18■□□□□ 0.02
HIST3H2BBQ8N257 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.18■□□□□ 0.02
HIST3H2BBQ8N257 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
HIST3H2BBQ8N257 TREX1-205ENST00000625293 1783 ntBASIC15.18■□□□□ 0.02
HIST3H2BBQ8N257 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIST3H2BBQ8N257 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC15.18■□□□□ 0.02
HIST3H2BBQ8N257 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIST3H2BBQ8N257 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST3H2BBQ8N257 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST3H2BBQ8N257 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.18■□□□□ 0.02
HIST3H2BBQ8N257 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIST3H2BBQ8N257 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
HIST3H2BBQ8N257 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC15.17■□□□□ 0.02
HIST3H2BBQ8N257 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
HIST3H2BBQ8N257 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.17■□□□□ 0.02
HIST3H2BBQ8N257 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.17■□□□□ 0.02
HIST3H2BBQ8N257 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST3H2BBQ8N257 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST3H2BBQ8N257 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
HIST3H2BBQ8N257 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST3H2BBQ8N257 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST3H2BBQ8N257 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
HIST3H2BBQ8N257 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.17■□□□□ 0.02
HIST3H2BBQ8N257 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST3H2BBQ8N257 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST3H2BBQ8N257 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST3H2BBQ8N257 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST3H2BBQ8N257 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST3H2BBQ8N257 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST3H2BBQ8N257 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST3H2BBQ8N257 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST3H2BBQ8N257 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST3H2BBQ8N257 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST3H2BBQ8N257 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST3H2BBQ8N257 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST3H2BBQ8N257 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST3H2BBQ8N257 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
HIST3H2BBQ8N257 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 AC067852.2-201ENST00000590513 2313 ntBASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 DUX4L28-201ENST00000623687 678 ntBASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 MKRN4P-201ENST00000444706 1521 ntBASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST3H2BBQ8N257 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms