Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AL691432.2-201ENST00000607222 2038 ntBASIC17.57■□□□□ 0.4
LRRTM1Q86UE6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM1Q86UE6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM1Q86UE6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM1Q86UE6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM1Q86UE6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRTM1Q86UE6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRTM1Q86UE6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM1Q86UE6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM1Q86UE6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM1Q86UE6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LRRTM1Q86UE6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM1Q86UE6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM1Q86UE6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM1Q86UE6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
LRRTM1Q86UE6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM1Q86UE6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.56■□□□□ 0.4
LRRTM1Q86UE6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LRRTM1Q86UE6 AP001330.3-201ENST00000520123 633 ntBASIC17.56■□□□□ 0.4
LRRTM1Q86UE6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM1Q86UE6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM1Q86UE6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRTM1Q86UE6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRTM1Q86UE6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LRRTM1Q86UE6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LRRTM1Q86UE6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRTM1Q86UE6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRTM1Q86UE6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM1Q86UE6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 AC138907.5-202ENST00000569484 235 ntBASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 KRT87P-202ENST00000534226 1464 ntBASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM1Q86UE6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LRRTM1Q86UE6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM1Q86UE6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRTM1Q86UE6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM1Q86UE6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM1Q86UE6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRTM1Q86UE6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.54■□□□□ 0.4
LRRTM1Q86UE6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM1Q86UE6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRTM1Q86UE6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRTM1Q86UE6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.54■□□□□ 0.4
LRRTM1Q86UE6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM1Q86UE6 DPP3P2-201ENST00000416030 1696 ntBASIC17.54■□□□□ 0.4
LRRTM1Q86UE6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM1Q86UE6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM1Q86UE6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.54■□□□□ 0.4
LRRTM1Q86UE6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM1Q86UE6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.54■□□□□ 0.4
LRRTM1Q86UE6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM1Q86UE6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
LRRTM1Q86UE6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRTM1Q86UE6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRTM1Q86UE6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRTM1Q86UE6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.53■□□□□ 0.4
LRRTM1Q86UE6 AP000974.1-201ENST00000623909 2387 ntBASIC17.53■□□□□ 0.4
LRRTM1Q86UE6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.53■□□□□ 0.4
LRRTM1Q86UE6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRTM1Q86UE6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRTM1Q86UE6 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
LRRTM1Q86UE6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRTM1Q86UE6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRTM1Q86UE6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.53■□□□□ 0.4
LRRTM1Q86UE6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.53■□□□□ 0.4
LRRTM1Q86UE6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.53■□□□□ 0.4
LRRTM1Q86UE6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LRRTM1Q86UE6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRTM1Q86UE6 AC005332.7-201ENST00000614046 2005 ntBASIC17.53■□□□□ 0.4
LRRTM1Q86UE6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.53■□□□□ 0.4
LRRTM1Q86UE6 KRT8P36-201ENST00000489121 1440 ntBASIC17.53■□□□□ 0.4
LRRTM1Q86UE6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRTM1Q86UE6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRTM1Q86UE6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms