Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00173Q6ZV60 TSPY13P-201ENST00000338964 914 ntBASIC14.67□□□□□ -0.06
LINC00173Q6ZV60 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00173Q6ZV60 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC14.67□□□□□ -0.06
LINC00173Q6ZV60 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC00173Q6ZV60 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC00173Q6ZV60 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC00173Q6ZV60 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC00173Q6ZV60 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00173Q6ZV60 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC00173Q6ZV60 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LINC00173Q6ZV60 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00173Q6ZV60 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LINC00173Q6ZV60 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC00173Q6ZV60 PWWP2AP1-201ENST00000429776 2273 ntBASIC14.67□□□□□ -0.06
LINC00173Q6ZV60 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00173Q6ZV60 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00173Q6ZV60 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 AC106820.2-201ENST00000563775 3264 ntBASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 AL138781.2-201ENST00000617896 1843 ntBASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00173Q6ZV60 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00173Q6ZV60 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC00173Q6ZV60 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00173Q6ZV60 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00173Q6ZV60 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00173Q6ZV60 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00173Q6ZV60 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00173Q6ZV60 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LINC00173Q6ZV60 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00173Q6ZV60 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC14.65□□□□□ -0.06
LINC00173Q6ZV60 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC00173Q6ZV60 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00173Q6ZV60 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00173Q6ZV60 Z82202.1-201ENST00000623446 1880 ntBASIC14.65□□□□□ -0.06
LINC00173Q6ZV60 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LINC00173Q6ZV60 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 AP000997.3-201ENST00000623333 2250 ntBASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 AC104581.1-202ENST00000635932 2618 ntBASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 GUK1-208ENST00000366728 842 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms