Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LCN1P1Q5VSP4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.28■□□□□ 0.52
LCN1P1Q5VSP4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCN1P1Q5VSP4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCN1P1Q5VSP4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.28■□□□□ 0.52
LCN1P1Q5VSP4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.28■□□□□ 0.52
LCN1P1Q5VSP4 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.28■□□□□ 0.52
LCN1P1Q5VSP4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LCN1P1Q5VSP4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCN1P1Q5VSP4 KRT16P2-201ENST00000414673 1423 ntBASIC18.28■□□□□ 0.52
LCN1P1Q5VSP4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.28■□□□□ 0.52
LCN1P1Q5VSP4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCN1P1Q5VSP4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCN1P1Q5VSP4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
LCN1P1Q5VSP4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
LCN1P1Q5VSP4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCN1P1Q5VSP4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LCN1P1Q5VSP4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LCN1P1Q5VSP4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LCN1P1Q5VSP4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.27■□□□□ 0.52
LCN1P1Q5VSP4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LCN1P1Q5VSP4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.27■□□□□ 0.52
LCN1P1Q5VSP4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LCN1P1Q5VSP4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.27■□□□□ 0.52
LCN1P1Q5VSP4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LCN1P1Q5VSP4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.27■□□□□ 0.52
LCN1P1Q5VSP4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.27■□□□□ 0.52
LCN1P1Q5VSP4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LCN1P1Q5VSP4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.27■□□□□ 0.52
LCN1P1Q5VSP4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.27■□□□□ 0.52
LCN1P1Q5VSP4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LCN1P1Q5VSP4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LCN1P1Q5VSP4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.27■□□□□ 0.52
LCN1P1Q5VSP4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LCN1P1Q5VSP4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LCN1P1Q5VSP4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
LCN1P1Q5VSP4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.27■□□□□ 0.51
LCN1P1Q5VSP4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.27■□□□□ 0.51
LCN1P1Q5VSP4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LCN1P1Q5VSP4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LCN1P1Q5VSP4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCN1P1Q5VSP4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCN1P1Q5VSP4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCN1P1Q5VSP4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCN1P1Q5VSP4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.26■□□□□ 0.51
LCN1P1Q5VSP4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LCN1P1Q5VSP4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LCN1P1Q5VSP4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.26■□□□□ 0.51
LCN1P1Q5VSP4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCN1P1Q5VSP4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.26■□□□□ 0.51
LCN1P1Q5VSP4 AL358852.1-201ENST00000623174 1268 ntBASIC18.26■□□□□ 0.51
LCN1P1Q5VSP4 RARRES2P11-201ENST00000635158 484 ntBASIC18.26■□□□□ 0.51
LCN1P1Q5VSP4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCN1P1Q5VSP4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LCN1P1Q5VSP4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.26■□□□□ 0.51
LCN1P1Q5VSP4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.26■□□□□ 0.51
LCN1P1Q5VSP4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LCN1P1Q5VSP4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCN1P1Q5VSP4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LCN1P1Q5VSP4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCN1P1Q5VSP4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCN1P1Q5VSP4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCN1P1Q5VSP4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LCN1P1Q5VSP4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCN1P1Q5VSP4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
LCN1P1Q5VSP4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LCN1P1Q5VSP4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.25■□□□□ 0.51
LCN1P1Q5VSP4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.25■□□□□ 0.51
LCN1P1Q5VSP4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.25■□□□□ 0.51
LCN1P1Q5VSP4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCN1P1Q5VSP4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCN1P1Q5VSP4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCN1P1Q5VSP4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.25■□□□□ 0.51
LCN1P1Q5VSP4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCN1P1Q5VSP4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCN1P1Q5VSP4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LCN1P1Q5VSP4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCN1P1Q5VSP4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCN1P1Q5VSP4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P1Q5VSP4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P1Q5VSP4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P1Q5VSP4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P1Q5VSP4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
LCN1P1Q5VSP4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P1Q5VSP4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P1Q5VSP4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P1Q5VSP4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P1Q5VSP4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
LCN1P1Q5VSP4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P1Q5VSP4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P1Q5VSP4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P1Q5VSP4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P1Q5VSP4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.24■□□□□ 0.51
LCN1P1Q5VSP4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P1Q5VSP4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P1Q5VSP4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.24■□□□□ 0.51
LCN1P1Q5VSP4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P1Q5VSP4 AC138907.5-202ENST00000569484 235 ntBASIC18.24■□□□□ 0.51
LCN1P1Q5VSP4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P1Q5VSP4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms