Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RUNDC3AQ59EK9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RUNDC3AQ59EK9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RUNDC3AQ59EK9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RUNDC3AQ59EK9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RUNDC3AQ59EK9 DPP3P2-201ENST00000416030 1696 ntBASIC19.12■□□□□ 0.65
RUNDC3AQ59EK9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RUNDC3AQ59EK9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RUNDC3AQ59EK9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RUNDC3AQ59EK9 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RUNDC3AQ59EK9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RUNDC3AQ59EK9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RUNDC3AQ59EK9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.12■□□□□ 0.65
RUNDC3AQ59EK9 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RUNDC3AQ59EK9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RUNDC3AQ59EK9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RUNDC3AQ59EK9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.11■□□□□ 0.65
RUNDC3AQ59EK9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RUNDC3AQ59EK9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RUNDC3AQ59EK9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RUNDC3AQ59EK9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RUNDC3AQ59EK9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RUNDC3AQ59EK9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RUNDC3AQ59EK9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.11■□□□□ 0.65
RUNDC3AQ59EK9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.11■□□□□ 0.65
RUNDC3AQ59EK9 KRT18P20-201ENST00000548986 1279 ntBASIC19.11■□□□□ 0.65
RUNDC3AQ59EK9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RUNDC3AQ59EK9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.11■□□□□ 0.65
RUNDC3AQ59EK9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RUNDC3AQ59EK9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.11■□□□□ 0.65
RUNDC3AQ59EK9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RUNDC3AQ59EK9 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.11■□□□□ 0.65
RUNDC3AQ59EK9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RUNDC3AQ59EK9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.1■□□□□ 0.65
RUNDC3AQ59EK9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RUNDC3AQ59EK9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RUNDC3AQ59EK9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RUNDC3AQ59EK9 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RUNDC3AQ59EK9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RUNDC3AQ59EK9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
RUNDC3AQ59EK9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RUNDC3AQ59EK9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.1■□□□□ 0.65
RUNDC3AQ59EK9 CCDC92B-201ENST00000575506 885 ntBASIC19.1■□□□□ 0.65
RUNDC3AQ59EK9 AC243732.1-201ENST00000612648 864 ntBASIC19.1■□□□□ 0.65
RUNDC3AQ59EK9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RUNDC3AQ59EK9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.1■□□□□ 0.65
RUNDC3AQ59EK9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RUNDC3AQ59EK9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RUNDC3AQ59EK9 TMEM179-206ENST00000616017 1645 ntBASIC19.1■□□□□ 0.65
RUNDC3AQ59EK9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RUNDC3AQ59EK9 AL691432.2-201ENST00000607222 2038 ntBASIC19.1■□□□□ 0.65
RUNDC3AQ59EK9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RUNDC3AQ59EK9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RUNDC3AQ59EK9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 LINC02228-203ENST00000641970 1355 ntBASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 AC142381.2-201ENST00000566120 298 ntBASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 AL139246.5-201ENST00000606645 996 ntBASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RUNDC3AQ59EK9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RUNDC3AQ59EK9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RUNDC3AQ59EK9 RBM17P2-201ENST00000616397 1405 ntBASIC19.08■□□□□ 0.65
RUNDC3AQ59EK9 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
RUNDC3AQ59EK9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
RUNDC3AQ59EK9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RUNDC3AQ59EK9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RUNDC3AQ59EK9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
RUNDC3AQ59EK9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RUNDC3AQ59EK9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RUNDC3AQ59EK9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RUNDC3AQ59EK9 AC007322.3-201ENST00000426526 701 ntBASIC19.08■□□□□ 0.64
RUNDC3AQ59EK9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.08■□□□□ 0.64
RUNDC3AQ59EK9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.08■□□□□ 0.64
RUNDC3AQ59EK9 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.08■□□□□ 0.64
RUNDC3AQ59EK9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms