Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
KNTC1P50748 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
KNTC1P50748 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
KNTC1P50748 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
KNTC1P50748 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.33■□□□□ 0.69
KNTC1P50748 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
KNTC1P50748 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
KNTC1P50748 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.33■□□□□ 0.69
KNTC1P50748 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
KNTC1P50748 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
KNTC1P50748 HTR7P1-201ENST00000538670 1336 ntBASIC19.33■□□□□ 0.69
KNTC1P50748 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.33■□□□□ 0.69
KNTC1P50748 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
KNTC1P50748 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KNTC1P50748 AL390719.1-204ENST00000412397 1219 ntBASIC19.33■□□□□ 0.68
KNTC1P50748 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.33■□□□□ 0.68
KNTC1P50748 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.33■□□□□ 0.68
KNTC1P50748 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.33■□□□□ 0.68
KNTC1P50748 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KNTC1P50748 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
KNTC1P50748 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.32■□□□□ 0.68
KNTC1P50748 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KNTC1P50748 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.32■□□□□ 0.68
KNTC1P50748 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KNTC1P50748 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KNTC1P50748 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.32■□□□□ 0.68
KNTC1P50748 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.32■□□□□ 0.68
KNTC1P50748 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
KNTC1P50748 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KNTC1P50748 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
KNTC1P50748 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KNTC1P50748 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KNTC1P50748 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.32■□□□□ 0.68
KNTC1P50748 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KNTC1P50748 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.32■□□□□ 0.68
KNTC1P50748 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KNTC1P50748 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.32■□□□□ 0.68
KNTC1P50748 FAM197Y1-201ENST00000421178 764 ntBASIC19.32■□□□□ 0.68
KNTC1P50748 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
KNTC1P50748 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.32■□□□□ 0.68
KNTC1P50748 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.32■□□□□ 0.68
KNTC1P50748 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.32■□□□□ 0.68
KNTC1P50748 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.32■□□□□ 0.68
KNTC1P50748 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KNTC1P50748 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KNTC1P50748 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
KNTC1P50748 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
KNTC1P50748 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.31■□□□□ 0.68
KNTC1P50748 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
KNTC1P50748 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.31■□□□□ 0.68
KNTC1P50748 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.31■□□□□ 0.68
KNTC1P50748 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KNTC1P50748 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KNTC1P50748 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.31■□□□□ 0.68
KNTC1P50748 CYP2D8P-201ENST00000433633 1490 ntBASIC19.31■□□□□ 0.68
KNTC1P50748 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KNTC1P50748 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KNTC1P50748 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KNTC1P50748 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.31■□□□□ 0.68
KNTC1P50748 LINC01568-207ENST00000641790 1380 ntBASIC19.3■□□□□ 0.68
KNTC1P50748 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KNTC1P50748 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KNTC1P50748 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KNTC1P50748 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KNTC1P50748 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KNTC1P50748 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KNTC1P50748 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.3■□□□□ 0.68
KNTC1P50748 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KNTC1P50748 RBM17P1-201ENST00000453646 1190 ntBASIC19.3■□□□□ 0.68
KNTC1P50748 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.3■□□□□ 0.68
KNTC1P50748 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.3■□□□□ 0.68
KNTC1P50748 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
KNTC1P50748 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.3■□□□□ 0.68
KNTC1P50748 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
KNTC1P50748 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KNTC1P50748 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KNTC1P50748 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KNTC1P50748 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
KNTC1P50748 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KNTC1P50748 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KNTC1P50748 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.29■□□□□ 0.68
KNTC1P50748 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KNTC1P50748 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KNTC1P50748 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KNTC1P50748 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
KNTC1P50748 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.29■□□□□ 0.68
KNTC1P50748 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
KNTC1P50748 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.29■□□□□ 0.68
KNTC1P50748 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.29■□□□□ 0.68
KNTC1P50748 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KNTC1P50748 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KNTC1P50748 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KNTC1P50748 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KNTC1P50748 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
KNTC1P50748 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.29■□□□□ 0.68
KNTC1P50748 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
KNTC1P50748 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KNTC1P50748 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.28■□□□□ 0.68
KNTC1P50748 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KNTC1P50748 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms