Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3BP20337 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB3BP20337 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB3BP20337 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB3BP20337 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.71■□□□□ 0.43
RAB3BP20337 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3BP20337 AC053503.5-201ENST00000601508 636 ntBASIC17.71■□□□□ 0.43
RAB3BP20337 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RAB3BP20337 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3BP20337 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3BP20337 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB3BP20337 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RAB3BP20337 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3BP20337 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB3BP20337 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB3BP20337 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RAB3BP20337 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.71■□□□□ 0.42
RAB3BP20337 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3BP20337 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3BP20337 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RAB3BP20337 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RAB3BP20337 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RAB3BP20337 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
RAB3BP20337 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3BP20337 TMEM179-206ENST00000616017 1645 ntBASIC17.7■□□□□ 0.42
RAB3BP20337 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB3BP20337 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RAB3BP20337 BX842568.3-201ENST00000418104 571 ntBASIC17.7■□□□□ 0.42
RAB3BP20337 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.7■□□□□ 0.42
RAB3BP20337 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.7■□□□□ 0.42
RAB3BP20337 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3BP20337 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3BP20337 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RAB3BP20337 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB3BP20337 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3BP20337 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.7■□□□□ 0.42
RAB3BP20337 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3BP20337 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.7■□□□□ 0.42
RAB3BP20337 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3BP20337 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3BP20337 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3BP20337 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3BP20337 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RAB3BP20337 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.69■□□□□ 0.42
RAB3BP20337 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3BP20337 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3BP20337 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3BP20337 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3BP20337 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3BP20337 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3BP20337 EEF1DP3-203ENST00000566025 782 ntBASIC17.69■□□□□ 0.42
RAB3BP20337 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.69■□□□□ 0.42
RAB3BP20337 MIR2861-201ENST00000636310 90 ntBASIC17.69■□□□□ 0.42
RAB3BP20337 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3BP20337 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3BP20337 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3BP20337 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3BP20337 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB3BP20337 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3BP20337 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3BP20337 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3BP20337 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3BP20337 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.69■□□□□ 0.42
RAB3BP20337 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RAB3BP20337 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB3BP20337 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
RAB3BP20337 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB3BP20337 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3BP20337 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3BP20337 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RAB3BP20337 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3BP20337 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
RAB3BP20337 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RAB3BP20337 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3BP20337 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3BP20337 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3BP20337 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3BP20337 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3BP20337 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3BP20337 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
RAB3BP20337 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB3BP20337 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB3BP20337 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RAB3BP20337 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RAB3BP20337 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RAB3BP20337 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB3BP20337 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RAB3BP20337 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3BP20337 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RAB3BP20337 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3BP20337 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3BP20337 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3BP20337 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
RAB3BP20337 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3BP20337 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3BP20337 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RAB3BP20337 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3BP20337 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RAB3BP20337 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
RAB3BP20337 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms