Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BRAFP15056 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.78■□□□□ 0.92
BRAFP15056 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRAFP15056 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
BRAFP15056 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.78■□□□□ 0.92
BRAFP15056 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
BRAFP15056 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.78■□□□□ 0.92
BRAFP15056 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.78■□□□□ 0.92
BRAFP15056 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.78■□□□□ 0.92
BRAFP15056 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.78■□□□□ 0.92
BRAFP15056 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
BRAFP15056 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
BRAFP15056 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BRAFP15056 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRAFP15056 SMG8-203ENST00000578922 2178 ntBASIC20.78■□□□□ 0.92
BRAFP15056 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
BRAFP15056 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BRAFP15056 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.77■□□□□ 0.92
BRAFP15056 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
BRAFP15056 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.77■□□□□ 0.92
BRAFP15056 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.77■□□□□ 0.92
BRAFP15056 EEF1DP3-203ENST00000566025 782 ntBASIC20.77■□□□□ 0.92
BRAFP15056 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.77■□□□□ 0.92
BRAFP15056 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.77■□□□□ 0.92
BRAFP15056 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BRAFP15056 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
BRAFP15056 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
BRAFP15056 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.77■□□□□ 0.92
BRAFP15056 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.76■□□□□ 0.91
BRAFP15056 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BRAFP15056 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BRAFP15056 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BRAFP15056 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BRAFP15056 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BRAFP15056 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BRAFP15056 AC016769.1-201ENST00000409132 1010 ntBASIC20.76■□□□□ 0.91
BRAFP15056 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.76■□□□□ 0.91
BRAFP15056 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BRAFP15056 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BRAFP15056 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BRAFP15056 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
BRAFP15056 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
BRAFP15056 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BRAFP15056 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
BRAFP15056 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BRAFP15056 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRAFP15056 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
BRAFP15056 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BRAFP15056 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.75■□□□□ 0.91
BRAFP15056 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRAFP15056 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRAFP15056 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
BRAFP15056 AL020996.1-203ENST00000536896 2307 ntBASIC20.75■□□□□ 0.91
BRAFP15056 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BRAFP15056 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRAFP15056 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
BRAFP15056 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.75■□□□□ 0.91
BRAFP15056 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRAFP15056 AP001160.3-201ENST00000601484 763 ntBASIC20.75■□□□□ 0.91
BRAFP15056 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.75■□□□□ 0.91
BRAFP15056 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRAFP15056 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BRAFP15056 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRAFP15056 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
BRAFP15056 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
BRAFP15056 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRAFP15056 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BRAFP15056 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.74■□□□□ 0.91
BRAFP15056 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BRAFP15056 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRAFP15056 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BRAFP15056 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRAFP15056 AC138907.5-202ENST00000569484 235 ntBASIC20.74■□□□□ 0.91
BRAFP15056 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.74■□□□□ 0.91
BRAFP15056 RARRES2P11-201ENST00000635158 484 ntBASIC20.74■□□□□ 0.91
BRAFP15056 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
BRAFP15056 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
BRAFP15056 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.74■□□□□ 0.91
BRAFP15056 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRAFP15056 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRAFP15056 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.73■□□□□ 0.91
BRAFP15056 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRAFP15056 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRAFP15056 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRAFP15056 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.73■□□□□ 0.91
BRAFP15056 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRAFP15056 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRAFP15056 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRAFP15056 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.73■□□□□ 0.91
BRAFP15056 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRAFP15056 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.73■□□□□ 0.91
BRAFP15056 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRAFP15056 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.73■□□□□ 0.91
BRAFP15056 AC053503.5-201ENST00000601508 636 ntBASIC20.73■□□□□ 0.91
BRAFP15056 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.73■□□□□ 0.91
BRAFP15056 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRAFP15056 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRAFP15056 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRAFP15056 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
BRAFP15056 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms