Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRFP11831 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRFP11831 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SRFP11831 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRFP11831 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.66■□□□□ 0.9
SRFP11831 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.66■□□□□ 0.9
SRFP11831 AC116562.2-201ENST00000507042 360 ntBASIC20.66■□□□□ 0.9
SRFP11831 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.66■□□□□ 0.9
SRFP11831 AC010947.1-201ENST00000623454 693 ntBASIC20.66■□□□□ 0.9
SRFP11831 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRFP11831 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.66■□□□□ 0.9
SRFP11831 CYP2D8P-201ENST00000433633 1490 ntBASIC20.66■□□□□ 0.9
SRFP11831 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRFP11831 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.66■□□□□ 0.9
SRFP11831 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRFP11831 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.66■□□□□ 0.9
SRFP11831 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRFP11831 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRFP11831 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SRFP11831 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SRFP11831 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SRFP11831 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRFP11831 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRFP11831 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRFP11831 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.65■□□□□ 0.9
SRFP11831 AL390955.1-201ENST00000428694 934 ntBASIC20.65■□□□□ 0.9
SRFP11831 SLC25A3P1-201ENST00000443844 931 ntBASIC20.65■□□□□ 0.9
SRFP11831 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.65■□□□□ 0.9
SRFP11831 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SRFP11831 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.65■□□□□ 0.9
SRFP11831 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRFP11831 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SRFP11831 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRFP11831 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.65■□□□□ 0.9
SRFP11831 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SRFP11831 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SRFP11831 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.64■□□□□ 0.89
SRFP11831 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRFP11831 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SRFP11831 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.64■□□□□ 0.89
SRFP11831 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.64■□□□□ 0.89
SRFP11831 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRFP11831 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.64■□□□□ 0.89
SRFP11831 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRFP11831 KSR1P1-201ENST00000446298 240 ntBASIC20.64■□□□□ 0.89
SRFP11831 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.64■□□□□ 0.89
SRFP11831 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.64■□□□□ 0.89
SRFP11831 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.64■□□□□ 0.89
SRFP11831 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.64■□□□□ 0.89
SRFP11831 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.64■□□□□ 0.89
SRFP11831 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRFP11831 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SRFP11831 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRFP11831 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRFP11831 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRFP11831 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRFP11831 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRFP11831 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
SRFP11831 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRFP11831 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRFP11831 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SRFP11831 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRFP11831 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRFP11831 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRFP11831 DUX4L26-201ENST00000489078 1255 ntBASIC20.63■□□□□ 0.89
SRFP11831 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
SRFP11831 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SRFP11831 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SRFP11831 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.63■□□□□ 0.89
SRFP11831 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRFP11831 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SRFP11831 CR392000.1-201ENST00000624770 1228 ntBASIC20.63■□□□□ 0.89
SRFP11831 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.63■□□□□ 0.89
SRFP11831 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRFP11831 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SRFP11831 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRFP11831 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRFP11831 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRFP11831 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SRFP11831 NIFKP9-201ENST00000419265 221 ntBASIC20.62■□□□□ 0.89
SRFP11831 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.62■□□□□ 0.89
SRFP11831 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRFP11831 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.62■□□□□ 0.89
SRFP11831 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.62■□□□□ 0.89
SRFP11831 NTF6B-201ENST00000591913 560 ntBASIC20.62■□□□□ 0.89
SRFP11831 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.62■□□□□ 0.89
SRFP11831 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.62■□□□□ 0.89
SRFP11831 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRFP11831 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRFP11831 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SRFP11831 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRFP11831 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRFP11831 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SRFP11831 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SRFP11831 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.61■□□□□ 0.89
SRFP11831 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.61■□□□□ 0.89
SRFP11831 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.61■□□□□ 0.89
SRFP11831 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.61■□□□□ 0.89
SRFP11831 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.61■□□□□ 0.89
SRFP11831 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms