Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE6O95741 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CPNE6O95741 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE6O95741 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE6O95741 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE6O95741 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE6O95741 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE6O95741 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.87■□□□□ 0.77
CPNE6O95741 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CPNE6O95741 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.87■□□□□ 0.77
CPNE6O95741 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
CPNE6O95741 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE6O95741 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE6O95741 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE6O95741 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE6O95741 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE6O95741 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE6O95741 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CPNE6O95741 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE6O95741 AF106564.1-201ENST00000607058 2553 ntBASIC19.87■□□□□ 0.77
CPNE6O95741 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE6O95741 CYP21A1P-202ENST00000354927 1481 ntBASIC19.86■□□□□ 0.77
CPNE6O95741 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CPNE6O95741 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CPNE6O95741 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE6O95741 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE6O95741 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.86■□□□□ 0.77
CPNE6O95741 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE6O95741 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE6O95741 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE6O95741 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CPNE6O95741 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE6O95741 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.86■□□□□ 0.77
CPNE6O95741 AC142381.4-202ENST00000563973 229 ntBASIC19.86■□□□□ 0.77
CPNE6O95741 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE6O95741 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE6O95741 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE6O95741 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE6O95741 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE6O95741 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE6O95741 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE6O95741 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE6O95741 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE6O95741 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE6O95741 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE6O95741 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE6O95741 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.85■□□□□ 0.77
CPNE6O95741 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.85■□□□□ 0.77
CPNE6O95741 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.85■□□□□ 0.77
CPNE6O95741 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.85■□□□□ 0.77
CPNE6O95741 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE6O95741 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.85■□□□□ 0.77
CPNE6O95741 AL158047.1-201ENST00000445918 881 ntBASIC19.85■□□□□ 0.77
CPNE6O95741 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.85■□□□□ 0.77
CPNE6O95741 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE6O95741 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.85■□□□□ 0.77
CPNE6O95741 AC073648.6-201ENST00000641589 218 ntBASIC19.85■□□□□ 0.77
CPNE6O95741 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.85■□□□□ 0.77
CPNE6O95741 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE6O95741 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE6O95741 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE6O95741 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE6O95741 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CPNE6O95741 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE6O95741 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE6O95741 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE6O95741 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE6O95741 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.84■□□□□ 0.77
CPNE6O95741 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.84■□□□□ 0.77
CPNE6O95741 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.84■□□□□ 0.77
CPNE6O95741 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CPNE6O95741 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE6O95741 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CPNE6O95741 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE6O95741 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.84■□□□□ 0.77
CPNE6O95741 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE6O95741 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE6O95741 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CPNE6O95741 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE6O95741 LINC01006-201ENST00000333319 2292 ntBASIC19.83■□□□□ 0.77
CPNE6O95741 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.83■□□□□ 0.77
CPNE6O95741 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CPNE6O95741 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.83■□□□□ 0.77
CPNE6O95741 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
CPNE6O95741 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE6O95741 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE6O95741 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE6O95741 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE6O95741 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.83■□□□□ 0.77
CPNE6O95741 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE6O95741 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.83■□□□□ 0.77
CPNE6O95741 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE6O95741 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.83■□□□□ 0.77
CPNE6O95741 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CPNE6O95741 PNMA6B-201ENST00000538162 1200 ntBASIC19.83■□□□□ 0.77
CPNE6O95741 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.83■□□□□ 0.76
CPNE6O95741 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CPNE6O95741 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.83■□□□□ 0.76
CPNE6O95741 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.83■□□□□ 0.76
CPNE6O95741 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms