Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIX6O95475 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIX6O95475 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIX6O95475 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SIX6O95475 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SIX6O95475 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.95■□□□□ 0.3
SIX6O95475 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIX6O95475 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SIX6O95475 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SIX6O95475 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
SIX6O95475 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
SIX6O95475 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIX6O95475 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SIX6O95475 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIX6O95475 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIX6O95475 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIX6O95475 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIX6O95475 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SIX6O95475 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIX6O95475 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SIX6O95475 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SIX6O95475 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIX6O95475 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIX6O95475 RARRES2P2-201ENST00000394842 485 ntBASIC16.94■□□□□ 0.3
SIX6O95475 MIR4508-201ENST00000584178 70 ntBASIC16.94■□□□□ 0.3
SIX6O95475 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.94■□□□□ 0.3
SIX6O95475 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.94■□□□□ 0.3
SIX6O95475 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIX6O95475 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIX6O95475 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SIX6O95475 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIX6O95475 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIX6O95475 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SIX6O95475 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIX6O95475 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIX6O95475 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIX6O95475 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.93■□□□□ 0.3
SIX6O95475 AL049812.1-201ENST00000432563 2267 ntBASIC16.93■□□□□ 0.3
SIX6O95475 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.93■□□□□ 0.3
SIX6O95475 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.93■□□□□ 0.3
SIX6O95475 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC16.93■□□□□ 0.3
SIX6O95475 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.93■□□□□ 0.3
SIX6O95475 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SIX6O95475 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
SIX6O95475 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIX6O95475 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIX6O95475 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIX6O95475 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.93■□□□□ 0.3
SIX6O95475 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIX6O95475 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIX6O95475 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIX6O95475 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIX6O95475 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.93■□□□□ 0.3
SIX6O95475 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIX6O95475 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.92■□□□□ 0.3
SIX6O95475 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SIX6O95475 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIX6O95475 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
SIX6O95475 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SIX6O95475 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SIX6O95475 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIX6O95475 AC006455.2-201ENST00000429931 906 ntBASIC16.92■□□□□ 0.3
SIX6O95475 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SIX6O95475 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SIX6O95475 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIX6O95475 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
SIX6O95475 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SIX6O95475 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SIX6O95475 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIX6O95475 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIX6O95475 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIX6O95475 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIX6O95475 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIX6O95475 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.91■□□□□ 0.3
SIX6O95475 AC011484.1-201ENST00000377652 1995 ntBASIC16.91■□□□□ 0.3
SIX6O95475 BX005040.4-201ENST00000637145 1518 ntBASIC16.91■□□□□ 0.3
SIX6O95475 AC021242.3-201ENST00000607598 1377 ntBASIC16.91■□□□□ 0.3
SIX6O95475 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SIX6O95475 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SIX6O95475 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIX6O95475 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIX6O95475 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SIX6O95475 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIX6O95475 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
SIX6O95475 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SIX6O95475 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIX6O95475 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIX6O95475 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SIX6O95475 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SIX6O95475 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIX6O95475 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIX6O95475 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.91■□□□□ 0.3
SIX6O95475 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SIX6O95475 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIX6O95475 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SIX6O95475 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIX6O95475 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SIX6O95475 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.9■□□□□ 0.3
SIX6O95475 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SIX6O95475 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms