Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
GPC4O75487 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.24■□□□□ 0.83
GPC4O75487 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
GPC4O75487 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GPC4O75487 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GPC4O75487 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.24■□□□□ 0.83
GPC4O75487 AL162412.1-201ENST00000567129 965 ntBASIC20.24■□□□□ 0.83
GPC4O75487 AL591742.1-201ENST00000604433 565 ntBASIC20.24■□□□□ 0.83
GPC4O75487 AC080038.1-201ENST00000611274 1154 ntBASIC20.24■□□□□ 0.83
GPC4O75487 AC231657.2-201ENST00000624556 255 ntBASIC20.24■□□□□ 0.83
GPC4O75487 AC073314.1-201ENST00000568729 2216 ntBASIC20.24■□□□□ 0.83
GPC4O75487 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GPC4O75487 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GPC4O75487 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
GPC4O75487 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.24■□□□□ 0.83
GPC4O75487 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GPC4O75487 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
GPC4O75487 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
GPC4O75487 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GPC4O75487 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GPC4O75487 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GPC4O75487 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
GPC4O75487 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.23■□□□□ 0.83
GPC4O75487 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.23■□□□□ 0.83
GPC4O75487 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.23■□□□□ 0.83
GPC4O75487 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.23■□□□□ 0.83
GPC4O75487 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
GPC4O75487 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.23■□□□□ 0.83
GPC4O75487 AC092666.2-201ENST00000613287 246 ntBASIC20.23■□□□□ 0.83
GPC4O75487 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.23■□□□□ 0.83
GPC4O75487 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
GPC4O75487 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.23■□□□□ 0.83
GPC4O75487 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GPC4O75487 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GPC4O75487 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.23■□□□□ 0.83
GPC4O75487 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GPC4O75487 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GPC4O75487 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
GPC4O75487 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GPC4O75487 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.22■□□□□ 0.83
GPC4O75487 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
GPC4O75487 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GPC4O75487 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GPC4O75487 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GPC4O75487 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GPC4O75487 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
GPC4O75487 AC068338.2-201ENST00000563278 1430 ntBASIC20.22■□□□□ 0.83
GPC4O75487 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.22■□□□□ 0.83
GPC4O75487 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GPC4O75487 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GPC4O75487 AC007322.3-201ENST00000426526 701 ntBASIC20.22■□□□□ 0.83
GPC4O75487 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.22■□□□□ 0.83
GPC4O75487 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.22■□□□□ 0.83
GPC4O75487 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GPC4O75487 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
GPC4O75487 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.22■□□□□ 0.83
GPC4O75487 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
GPC4O75487 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
GPC4O75487 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GPC4O75487 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GPC4O75487 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
GPC4O75487 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.21■□□□□ 0.83
GPC4O75487 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GPC4O75487 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GPC4O75487 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.21■□□□□ 0.83
GPC4O75487 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GPC4O75487 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GPC4O75487 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
GPC4O75487 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
GPC4O75487 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GPC4O75487 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GPC4O75487 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
GPC4O75487 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
GPC4O75487 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
GPC4O75487 CDCA4P2-201ENST00000441182 718 ntBASIC20.21■□□□□ 0.83
GPC4O75487 CDV3P1-201ENST00000471403 739 ntBASIC20.21■□□□□ 0.83
GPC4O75487 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.21■□□□□ 0.83
GPC4O75487 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.21■□□□□ 0.83
GPC4O75487 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GPC4O75487 AC073111.5-205ENST00000641717 521 ntBASIC20.21■□□□□ 0.83
GPC4O75487 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GPC4O75487 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GPC4O75487 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GPC4O75487 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.21■□□□□ 0.83
GPC4O75487 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GPC4O75487 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
GPC4O75487 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GPC4O75487 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
GPC4O75487 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.2■□□□□ 0.82
GPC4O75487 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
GPC4O75487 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.2■□□□□ 0.82
GPC4O75487 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GPC4O75487 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
GPC4O75487 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
GPC4O75487 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
GPC4O75487 RAP2CP1-201ENST00000605103 478 ntBASIC20.2■□□□□ 0.82
GPC4O75487 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GPC4O75487 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GPC4O75487 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
GPC4O75487 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms