Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.521e-7■■□□□ 13.2
PRPF8Q6P2Q9 KISS1R-202ENST00000592648 507 ntTSL 517.57■□□□□ 0.41e-7■■□□□ 13.2
PRPF8Q6P2Q9 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.47■□□□□ 0.071e-7■■□□□ 13.2
PRPF8Q6P2Q9 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.262e-7■■□□□ 13.2
PRPF8Q6P2Q9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.55■□□□□ 0.42e-7■■□□□ 13.2
PRPF8Q6P2Q9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.342e-7■■□□□ 13.2
PRPF8Q6P2Q9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.58■□□□□ 0.242e-7■■□□□ 13.2
PRPF8Q6P2Q9 TGIF1-221ENST00000552383 1267 ntTSL 214.38□□□□□ -0.112e-7■■□□□ 13.2
PRPF8Q6P2Q9 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.31□□□□□ -0.282e-7■■□□□ 13.2
PRPF8Q6P2Q9 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.33□□□□□ -0.442e-7■■□□□ 13.2
PRPF8Q6P2Q9 TGIF1-209ENST00000546979 554 ntTSL 311.65□□□□□ -0.542e-7■■□□□ 13.2
PRPF8Q6P2Q9 TGIF1-216ENST00000550958 706 ntTSL 37.54□□□□□ -1.22e-7■■□□□ 13.2
PRPF8Q6P2Q9 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC6.99□□□□□ -1.292e-7■■□□□ 13.2
PRPF8Q6P2Q9 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.37□□□□□ -1.552e-7■■□□□ 13.2
PRPF8Q6P2Q9 TGIF1-215ENST00000549780 801 ntTSL 55.08□□□□□ -1.62e-7■■□□□ 13.2
PRPF8Q6P2Q9 TGIF1-212ENST00000549253 563 ntTSL 34.6□□□□□ -1.672e-7■■□□□ 13.2
PRPF8Q6P2Q9 BECN1-221ENST00000612631 559 ntTSL 414.65□□□□□ -0.066e-8■■□□□ 13.2
PRPF8Q6P2Q9 AC004890.2-204ENST00000481968 304 ntBASIC13.85□□□□□ -0.196e-8■■□□□ 13.2
PRPF8Q6P2Q9 ABCC3-213ENST00000513589 582 ntTSL 410.59□□□□□ -0.712e-13■■□□□ 13.2
PRPF8Q6P2Q9 PGD-210ENST00000498356 790 ntTSL 36.1□□□□□ -1.431e-6■■□□□ 13.2
PRPF8Q6P2Q9 ATXN1-205ENST00000479680 568 ntTSL 45.56□□□□□ -1.526e-17■■□□□ 13.2
PRPF8Q6P2Q9 ATXN1-210ENST00000498374 1648 ntTSL 1 (best)5.43□□□□□ -1.546e-17■■□□□ 13.2
PRPF8Q6P2Q9 ATXN1-207ENST00000483954 744 ntTSL 33.69□□□□□ -1.826e-17■■□□□ 13.2
PRPF8Q6P2Q9 ATXN1-208ENST00000492857 647 ntTSL 43.62□□□□□ -1.836e-17■■□□□ 13.2
PRPF8Q6P2Q9 ATXN1-203ENST00000467008 3362 ntTSL 1 (best)2.56□□□□□ -26e-17■■□□□ 13.2
PRPF8Q6P2Q9 LLGL2-214ENST00000579392 483 ntTSL 412.81□□□□□ -0.361e-17■■□□□ 13.2
PRPF8Q6P2Q9 LLGL2-216ENST00000580578 577 ntTSL 411.91□□□□□ -0.51e-17■■□□□ 13.2
PRPF8Q6P2Q9 RWDD2B-203ENST00000471269 571 ntTSL 512.86□□□□□ -0.352e-6■■□□□ 13.2
PRPF8Q6P2Q9 RWDD2B-205ENST00000481411 950 ntTSL 29.87□□□□□ -0.832e-6■■□□□ 13.2
PRPF8Q6P2Q9 RWDD2B-206ENST00000486719 1789 ntTSL 59.51□□□□□ -0.892e-6■■□□□ 13.2
PRPF8Q6P2Q9 RWDD2B-202ENST00000466746 842 ntTSL 25.43□□□□□ -1.542e-6■■□□□ 13.2
PRPF8Q6P2Q9 RWDD2B-201ENST00000286777 1625 ntTSL 25.09□□□□□ -1.592e-6■■□□□ 13.2
PRPF8Q6P2Q9 RWDD2B-204ENST00000472184 1787 ntTSL 33.68□□□□□ -1.822e-6■■□□□ 13.2
PRPF8Q6P2Q9 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.882e-6■■□□□ 13.2
PRPF8Q6P2Q9 PABPC1L-214ENST00000482486 541 ntTSL 28.46□□□□□ -1.063e-6■■□□□ 13.2
PRPF8Q6P2Q9 TMEM120A-213ENST00000490656 660 ntTSL 313.62□□□□□ -0.231e-7■■□□□ 13.2
PRPF8Q6P2Q9 SLX1A-206ENST00000565081 1558 ntTSL 216.94■□□□□ 0.36e-9■■□□□ 13.2
PRPF8Q6P2Q9 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.276e-9■■□□□ 13.2
PRPF8Q6P2Q9 SLX1A-204ENST00000563995 589 ntTSL 316.48■□□□□ 0.236e-9■■□□□ 13.2
PRPF8Q6P2Q9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.136e-9■■□□□ 13.2
PRPF8Q6P2Q9 SLX1A-SULT1A3-204ENST00000567520 2227 ntTSL 214.54□□□□□ -0.086e-9■■□□□ 13.2
PRPF8Q6P2Q9 SLX1A-SULT1A3-205ENST00000568997 2834 ntTSL 214.14□□□□□ -0.156e-9■■□□□ 13.2
PRPF8Q6P2Q9 SLX1A-SULT1A3-201ENST00000561824 1838 ntTSL 213.95□□□□□ -0.186e-9■■□□□ 13.2
PRPF8Q6P2Q9 SLX1A-SULT1A3-206ENST00000569959 2424 ntTSL 213.89□□□□□ -0.196e-9■■□□□ 13.2
PRPF8Q6P2Q9 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.69□□□□□ -0.226e-9■■□□□ 13.2
PRPF8Q6P2Q9 MYO9B-215ENST00000599420 971 ntTSL 512.37□□□□□ -0.433e-8■■□□□ 13.2
PRPF8Q6P2Q9 MYO9B-218ENST00000602158 495 ntTSL 310.06□□□□□ -0.83e-8■■□□□ 13.2
PRPF8Q6P2Q9 UMPS-211ENST00000628619 228 ntTSL 5 BASIC9.38□□□□□ -0.913e-8■■□□□ 13.2
PRPF8Q6P2Q9 GRHPR-208ENST00000493368 1136 ntTSL 1 (best)14.47□□□□□ -0.092e-7■■□□□ 13.2
PRPF8Q6P2Q9 GRHPR-206ENST00000487399 952 ntTSL 212.55□□□□□ -0.47e-7■■□□□ 13.2
PRPF8Q6P2Q9 SLC38A3-205ENST00000610458 584 ntTSL 311.03□□□□□ -0.644e-11■■□□□ 13.2
PRPF8Q6P2Q9 ACTR1A-203ENST00000480947 512 ntTSL 312.74□□□□□ -0.374e-6■■□□□ 13.2
PRPF8Q6P2Q9 UBAP2L-209ENST00000437652 911 ntTSL 322.55■■□□□ 1.26e-8■■□□□ 13.2
PRPF8Q6P2Q9 UBAP2L-205ENST00000412596 980 ntTSL 522.46■■□□□ 1.196e-8■■□□□ 13.2
PRPF8Q6P2Q9 UBAP2L-204ENST00000368504 1120 ntTSL 512.4□□□□□ -0.426e-8■■□□□ 13.2
PRPF8Q6P2Q9 GOSR1-211ENST00000579905 2166 ntTSL 58.07□□□□□ -1.121e-8■■□□□ 13.2
PRPF8Q6P2Q9 RSAD1-205ENST00000509398 539 ntTSL 413.14□□□□□ -0.312e-6■■□□□ 13.2
PRPF8Q6P2Q9 FAM102A-205ENST00000479828 366 ntTSL 513.06□□□□□ -0.326e-9■■□□□ 13.2
PRPF8Q6P2Q9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.09■□□□□ 0.012e-8■■□□□ 13.2
PRPF8Q6P2Q9 ATXN2-209ENST00000482777 4369 ntTSL 28.91□□□□□ -0.986e-9■■□□□ 13.2
PRPF8Q6P2Q9 ATXN2-221ENST00000550844 3104 ntTSL 27.88□□□□□ -1.156e-9■■□□□ 13.2
PRPF8Q6P2Q9 RASSF4-203ENST00000428466 435 ntTSL 311.27□□□□□ -0.615e-8■■□□□ 13.2
PRPF8Q6P2Q9 RASSF4-204ENST00000462822 354 ntTSL 37.68□□□□□ -1.185e-8■■□□□ 13.2
PRPF8Q6P2Q9 TM9SF4-204ENST00000442842 563 ntTSL 410.98□□□□□ -0.659e-8■■□□□ 13.2
PRPF8Q6P2Q9 TM9SF4-205ENST00000450829 550 ntTSL 44.77□□□□□ -1.659e-8■■□□□ 13.2
PRPF8Q6P2Q9 FAAP100-206ENST00000544302 1091 ntTSL 218■□□□□ 0.476e-7■■□□□ 13.2
PRPF8Q6P2Q9 TCIRG1-212ENST00000530802 223 ntTSL 1 (best)15.6■□□□□ 0.092e-8■■□□□ 13.2
PRPF8Q6P2Q9 FAAP100-204ENST00000536161 924 ntTSL 313.77□□□□□ -0.216e-7■■□□□ 13.2
PRPF8Q6P2Q9 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.38e-7■■□□□ 13.2
PRPF8Q6P2Q9 FAAP100-205ENST00000541246 1101 ntTSL 513.12□□□□□ -0.316e-7■■□□□ 13.2
PRPF8Q6P2Q9 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.318e-7■■□□□ 13.2
PRPF8Q6P2Q9 FAM193A-208ENST00000513350 3727 ntAPPRIS ALT2 TSL 28.24□□□□□ -1.092e-6■■□□□ 13.2
PRPF8Q6P2Q9 TMBIM6-216ENST00000549130 446 ntTSL 57.45□□□□□ -1.222e-8■■□□□ 13.2
PRPF8Q6P2Q9 PABPC1L-207ENST00000372824 2223 ntTSL 2 BASIC10.51□□□□□ -0.731e-6■■□□□ 13.2
PRPF8Q6P2Q9 ARFGAP2-213ENST00000527776 709 ntTSL 28.66□□□□□ -1.022e-11■■□□□ 13.2
PRPF8Q6P2Q9 PRMT7-221ENST00000566687 384 ntTSL 312.13□□□□□ -0.475e-8■■□□□ 13.2
PRPF8Q6P2Q9 PRMT7-222ENST00000566708 692 ntTSL 312.02□□□□□ -0.495e-8■■□□□ 13.2
PRPF8Q6P2Q9 RNF10-224ENST00000546262 776 ntTSL 414.17□□□□□ -0.141e-6■■□□□ 13.2
PRPF8Q6P2Q9 SEC13-215ENST00000477547 1313 ntTSL 212.8□□□□□ -0.361e-9■■□□□ 13.2
PRPF8Q6P2Q9 PLEKHG2-205ENST00000451354 871 ntTSL 513.07□□□□□ -0.321e-7■■□□□ 13.2
PRPF8Q6P2Q9 COPA-203ENST00000481040 578 ntTSL 31.43□□□□□ -2.188e-7■■□□□ 13.2
PRPF8Q6P2Q9 RBM39-220ENST00000455343 441 ntTSL 53.3□□□□□ -1.886e-11■■□□□ 13.2
PRPF8Q6P2Q9 USF1-206ENST00000491629 933 ntTSL 211.95□□□□□ -0.53e-7■■□□□ 13.2
PRPF8Q6P2Q9 USF1-209ENST00000529476 581 ntTSL 311.64□□□□□ -0.553e-7■■□□□ 13.2
PRPF8Q6P2Q9 USF1-207ENST00000496363 990 ntTSL 211.44□□□□□ -0.583e-7■■□□□ 13.2
PRPF8Q6P2Q9 USF1-211ENST00000534633 610 ntTSL 510.97□□□□□ -0.653e-7■■□□□ 13.2
PRPF8Q6P2Q9 NUMB-207ENST00000553997 713 ntTSL 35.27□□□□□ -1.573e-7■■□□□ 13.2
PRPF8Q6P2Q9 NUMB-226ENST00000557486 619 ntTSL 32.72□□□□□ -1.973e-7■■□□□ 13.2
PRPF8Q6P2Q9 DHPS-204ENST00000593423 540 ntTSL 410.62□□□□□ -0.714e-7■■□□□ 13.2
PRPF8Q6P2Q9 DHPS-208ENST00000595100 603 ntTSL 510.33□□□□□ -0.764e-7■■□□□ 13.2
PRPF8Q6P2Q9 DHPS-206ENST00000593473 676 ntTSL 29.68□□□□□ -0.864e-7■■□□□ 13.2
PRPF8Q6P2Q9 GS1-600G8.3-201ENST00000431486 2249 ntTSL 1 (best) BASIC7.72□□□□□ -1.178e-8■■□□□ 13.2
PRPF8Q6P2Q9 TNFRSF10B-207ENST00000523504 1464 ntTSL 217.8■□□□□ 0.441e-8■■□□□ 13.2
PRPF8Q6P2Q9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.421e-8■■□□□ 13.2
PRPF8Q6P2Q9 TNFRSF10B-201ENST00000276431 4146 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.951e-8■■□□□ 13.2
PRPF8Q6P2Q9 CNTROB-209ENST00000574430 652 ntTSL 314.72□□□□□ -0.058e-7■■□□□ 13.2
PRPF8Q6P2Q9 EPB41L1-214ENST00000451082 803 ntTSL 511.01□□□□□ -0.651e-7■■□□□ 13.2
PRPF8Q6P2Q9 EPB41L1-203ENST00000373941 2652 ntAPPRIS ALT1 TSL 5 BASIC8.71□□□□□ -1.011e-7■■□□□ 13.2
PRPF8Q6P2Q9 DCAF11-235ENST00000561016 522 ntTSL 413.87□□□□□ -0.191e-15■■□□□ 13.2
PRPF8Q6P2Q9 DCAF11-225ENST00000559593 575 ntTSL 410.29□□□□□ -0.761e-15■■□□□ 13.2
Retrieved 100 of 73,762 protein–RNA pairs in 1391.4 ms