RNA–Protein interactions for RNA: ENST00000557486.1

NUMB-226, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 3

Gene NUMB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-226ENST00000557486 AEBP2Q6ZN18 517 aaPredicted RBP18.48■□□□□ 0.55
NUMB-226ENST00000557486 CHIC1Q5VXU3 224 aa18.43■□□□□ 0.54
NUMB-226ENST00000557486 PHF23Q9BUL5 403 aaPredicted RBP16.28■□□□□ 0.2
NUMB-226ENST00000557486 SENP3Q9H4L4 574 aaPredicted RBP15.56■□□□□ 0.08
NUMB-226ENST00000557486 PLPPR3Q6T4P5 718 aa15.12■□□□□ 0.01
NUMB-226ENST00000557486 FOXD1Q16676 465 aa14.41□□□□□ -0.1
NUMB-226ENST00000557486 PPP6R1Q9UPN7 881 aa14.22□□□□□ -0.13
NUMB-226ENST00000557486 ADRA2BP18089 450 aa14.21□□□□□ -0.13
NUMB-226ENST00000557486 PIAS4Q8N2W9 510 aaPredicted RBP13.68□□□□□ -0.22
NUMB-226ENST00000557486 KCNA4P22459 653 aa13.57□□□□□ -0.24
NUMB-226ENST00000557486 PPP4R3CPQ6ZMV5 832 aa13.39□□□□□ -0.27
NUMB-226ENST00000557486 NCBP3Q53F19 620 aaKnown RBP13.13□□□□□ -0.31
NUMB-226ENST00000557486 MSH5O43196 834 aa13.1□□□□□ -0.31
NUMB-226ENST00000557486 EHMT2Q96KQ7 1210 aa13.1□□□□□ -0.31
NUMB-226ENST00000557486 NPM3O75607 178 aaKnown RBP12.98□□□□□ -0.33
NUMB-226ENST00000557486 SLC4A1APQ9BWU0 796 aaKnown RBP12.98□□□□□ -0.33
NUMB-226ENST00000557486 SCAF1Q9H7N4 1312 aaKnown RBP12.93□□□□□ -0.34
NUMB-226ENST00000557486 CNKSR2Q8WXI2 1034 aa12.92□□□□□ -0.34
NUMB-226ENST00000557486 MAPK8IP2Q13387 824 aaPredicted RBP12.77□□□□□ -0.37
NUMB-226ENST00000557486 CSRNP3Q8WYN3 585 aa12.77□□□□□ -0.37
NUMB-226ENST00000557486 RNF216Q9NWF9 866 aaPredicted RBP12.57□□□□□ -0.4
NUMB-226ENST00000557486 DNAJC5BQ9UF47 199 aa12.56□□□□□ -0.4
NUMB-226ENST00000557486 ZBTB22O15209 634 aa12.54□□□□□ -0.4
NUMB-226ENST00000557486 DMRT2Q9Y5R5 561 aa12.51□□□□□ -0.41
NUMB-226ENST00000557486 HOXD11P31277 338 aaPredicted RBP12.42□□□□□ -0.42
NUMB-226ENST00000557486 FOXD4L1Q9NU39 408 aa12.36□□□□□ -0.43
NUMB-226ENST00000557486 SLC4A2P04920 1241 aa12.18□□□□□ -0.46
NUMB-226ENST00000557486 MYCNP04198 464 aaPredicted RBP11.97□□□□□ -0.49
NUMB-226ENST00000557486 DCAF8L1A6NGE4 600 aa11.89□□□□□ -0.51
NUMB-226ENST00000557486 ATXN8OSP0DMR3 200 aa11.88□□□□□ -0.51
NUMB-226ENST00000557486 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.79□□□□□ -0.524e-7■□□□□ 9.5
NUMB-226ENST00000557486 U3KPZ7 1027 aaPredicted RBP11.7□□□□□ -0.54
NUMB-226ENST00000557486 POTEDQ86YR6 584 aa11.68□□□□□ -0.54
NUMB-226ENST00000557486 ATF5Q9Y2D1 282 aaPredicted RBP11.65□□□□□ -0.54
NUMB-226ENST00000557486 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.63□□□□□ -0.55
NUMB-226ENST00000557486 HNRNPUL2Q1KMD3 747 aaKnown RBP11.63□□□□□ -0.55
NUMB-226ENST00000557486 SAMD1Q6SPF0 538 aaPredicted RBP11.63□□□□□ -0.55
NUMB-226ENST00000557486 FKBP8Q14318 412 aa11.5□□□□□ -0.57
NUMB-226ENST00000557486 APLP2Q06481 763 aa11.4□□□□□ -0.58
NUMB-226ENST00000557486 ZNF219Q9P2Y4 722 aaPredicted RBP11.39□□□□□ -0.59
NUMB-226ENST00000557486 RNF39Q9H2S5 420 aa11.29□□□□□ -0.6
NUMB-226ENST00000557486 SPINK5Q9NQ38 1064 aaPredicted RBP11.24□□□□□ -0.61
NUMB-226ENST00000557486 RTN4Q9NQC3 1192 aaKnown RBP11.23□□□□□ -0.61
NUMB-226ENST00000557486 AMER1Q5JTC6 1135 aaPredicted RBP11.21□□□□□ -0.61
NUMB-226ENST00000557486 TRHP20396 242 aaPredicted RBP11.18□□□□□ -0.62
NUMB-226ENST00000557486 MKRN4PQ13434 485 aaPredicted RBP11.17□□□□□ -0.62
NUMB-226ENST00000557486 C1QBPQ07021 282 aaKnown RBP11.16□□□□□ -0.62
NUMB-226ENST00000557486 CAPN15O75808 1086 aa11.14□□□□□ -0.63
NUMB-226ENST00000557486 POLA2Q14181 598 aa11.11□□□□□ -0.63
NUMB-226ENST00000557486 SPDYE4A6NLX3 237 aa11.08□□□□□ -0.64
NUMB-226ENST00000557486 FBLN2P98095 1184 aa11.07□□□□□ -0.64
NUMB-226ENST00000557486 PROM2Q8N271 834 aa11.01□□□□□ -0.65
NUMB-226ENST00000557486 ABCB7O75027 752 aa10.99□□□□□ -0.65
NUMB-226ENST00000557486 FBXO3Q9UK99 471 aa10.94□□□□□ -0.66
NUMB-226ENST00000557486 ZBTB12Q9Y330 459 aaPredicted RBP10.94□□□□□ -0.66
NUMB-226ENST00000557486 DSG3P32926 999 aa10.89□□□□□ -0.67
NUMB-226ENST00000557486 VASPP50552 380 aaPredicted RBP10.83□□□□□ -0.68
NUMB-226ENST00000557486 SLC24A1O60721 1099 aa10.8□□□□□ -0.68
NUMB-226ENST00000557486 OSCARQ8IYS5 282 aa10.74□□□□□ -0.69
NUMB-226ENST00000557486 IFNLR1Q8IU57 520 aaPredicted RBP10.72□□□□□ -0.69
NUMB-226ENST00000557486 SPDYE2BA6NHP3 402 aa10.71□□□□□ -0.69
NUMB-226ENST00000557486 SPDYE6P0CI01 402 aa10.71□□□□□ -0.69
NUMB-226ENST00000557486 SPDYE2Q495Y8 402 aa10.71□□□□□ -0.69
NUMB-226ENST00000557486 ZNF692Q9BU19 519 aaPredicted RBP10.71□□□□□ -0.69
NUMB-226ENST00000557486 SSUH2Q9Y2M2 353 aa10.7□□□□□ -0.7
NUMB-226ENST00000557486 CACNB1Q02641 598 aaPredicted RBP10.65□□□□□ -0.7
NUMB-226ENST00000557486 PABPN1Q86U42 306 aaKnown RBP eCLIP10.6□□□□□ -0.71
NUMB-226ENST00000557486 STAG3Q9UJ98 1225 aa10.58□□□□□ -0.72
NUMB-226ENST00000557486 PKD2Q13563 968 aa10.53□□□□□ -0.72
NUMB-226ENST00000557486 KLHL34Q8N239 644 aa10.49□□□□□ -0.73
NUMB-226ENST00000557486 SPOCK2Q92563 424 aa10.49□□□□□ -0.73
NUMB-226ENST00000557486 PLCD3Q8N3E9 789 aa10.47□□□□□ -0.73
NUMB-226ENST00000557486 MIER1Q8N108 512 aa10.44□□□□□ -0.74
NUMB-226ENST00000557486 DCAF8L2P0C7V8 631 aa10.39□□□□□ -0.75
NUMB-226ENST00000557486 PLCB2Q00722 1185 aa10.37□□□□□ -0.75
NUMB-226ENST00000557486 ECM2O94769 699 aaPredicted RBP10.35□□□□□ -0.75
NUMB-226ENST00000557486 PLEKHG5O94827 1062 aa10.32□□□□□ -0.76
NUMB-226ENST00000557486 RBM42Q9BTD8 480 aaKnown RBP10.32□□□□□ -0.76
NUMB-226ENST00000557486 ZBTB47Q9UFB7 747 aaPredicted RBP10.32□□□□□ -0.76
NUMB-226ENST00000557486 AKT1S1Q96B36 256 aa10.31□□□□□ -0.76
NUMB-226ENST00000557486 SPDYE1Q8NFV5 336 aaPredicted RBP10.27□□□□□ -0.77
NUMB-226ENST00000557486 RGL2O15211 777 aa10.26□□□□□ -0.77
NUMB-226ENST00000557486 CIZ1Q9ULV3 898 aaPredicted RBP10.24□□□□□ -0.77
NUMB-226ENST00000557486 NPM1P06748 294 aaKnown RBP eCLIP10.22□□□□□ -0.77
NUMB-226ENST00000557486 REM2Q8IYK8 340 aaPredicted RBP10.21□□□□□ -0.77
NUMB-226ENST00000557486 HAP1P54257 671 aaPredicted RBP10.19□□□□□ -0.78
NUMB-226ENST00000557486 BBXQ8WY36 941 aaPredicted RBP10.19□□□□□ -0.78
NUMB-226ENST00000557486 CLEC11AQ9Y240 323 aa10.19□□□□□ -0.78
NUMB-226ENST00000557486 NUBP1P53384 320 aa10.18□□□□□ -0.78
NUMB-226ENST00000557486 CREBZFQ9NS37 354 aa10.18□□□□□ -0.78
NUMB-226ENST00000557486 PRR29P0C7W0 189 aa10.17□□□□□ -0.78
NUMB-226ENST00000557486 TRIM41Q8WV44 630 aa10.17□□□□□ -0.78
NUMB-226ENST00000557486 MNX1P50219 401 aaPredicted RBP10.14□□□□□ -0.79
NUMB-226ENST00000557486 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.14□□□□□ -0.79
NUMB-226ENST00000557486 GSE1Q14687 1217 aa10.13□□□□□ -0.79
NUMB-226ENST00000557486 PITPNM1O00562 1244 aa10.11□□□□□ -0.79
NUMB-226ENST00000557486 RNF25Q96BH1 459 aaPredicted RBP10.1□□□□□ -0.79
NUMB-226ENST00000557486 PAXIP1Q6ZW49 1069 aaPredicted RBP10.09□□□□□ -0.79
NUMB-226ENST00000557486 CHGAP10645 457 aaKnown RBP10.08□□□□□ -0.8
NUMB-226ENST00000557486 DCAF8Q5TAQ9 597 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms