RNA–Protein interactions for RNA: ENST00000553997.5

NUMB-207, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 3

Gene NUMB, Length 713 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-207ENST00000553997 AEBP2Q6ZN18 517 aaPredicted RBP21.21■□□□□ 0.99
NUMB-207ENST00000553997 CHIC1Q5VXU3 224 aa19.89■□□□□ 0.77
NUMB-207ENST00000553997 SENP3Q9H4L4 574 aaPredicted RBP18.03■□□□□ 0.48
NUMB-207ENST00000553997 PHF23Q9BUL5 403 aaPredicted RBP17.81■□□□□ 0.44
NUMB-207ENST00000553997 FOXD1Q16676 465 aa16.89■□□□□ 0.29
NUMB-207ENST00000553997 POTEDQ86YR6 584 aa15.85■□□□□ 0.13
NUMB-207ENST00000553997 MSH5O43196 834 aa15.82■□□□□ 0.12
NUMB-207ENST00000553997 PLPPR3Q6T4P5 718 aa15.76■□□□□ 0.11
NUMB-207ENST00000553997 PIAS4Q8N2W9 510 aaPredicted RBP15.68■□□□□ 0.1
NUMB-207ENST00000553997 PPP6R1Q9UPN7 881 aa15.67■□□□□ 0.1
NUMB-207ENST00000553997 ADRA2BP18089 450 aa15.58■□□□□ 0.08
NUMB-207ENST00000553997 NISCHQ9Y2I1 1504 aa14.91□□□□□ -0.02
NUMB-207ENST00000553997 MAPK8IP2Q13387 824 aaPredicted RBP14.39□□□□□ -0.11
NUMB-207ENST00000553997 DMRT2Q9Y5R5 561 aa14.29□□□□□ -0.12
NUMB-207ENST00000553997 SCAF1Q9H7N4 1312 aaKnown RBP14.16□□□□□ -0.14
NUMB-207ENST00000553997 PPP4R3CPQ6ZMV5 832 aa13.82□□□□□ -0.2
NUMB-207ENST00000553997 HOXD11P31277 338 aaPredicted RBP13.7□□□□□ -0.22
NUMB-207ENST00000553997 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
NUMB-207ENST00000553997 ABCC9O60706 1549 aa13.69□□□□□ -0.22
NUMB-207ENST00000553997 DCAF8L1A6NGE4 600 aa13.65□□□□□ -0.22
NUMB-207ENST00000553997 CNKSR2Q8WXI2 1034 aa13.59□□□□□ -0.23
NUMB-207ENST00000553997 RNF39Q9H2S5 420 aa13.52□□□□□ -0.25
NUMB-207ENST00000553997 RNF216Q9NWF9 866 aaPredicted RBP13.52□□□□□ -0.25
NUMB-207ENST00000553997 CCDC180Q9P1Z9 1646 aa13.46□□□□□ -0.26
NUMB-207ENST00000553997 C1QBPQ07021 282 aaKnown RBP13.28□□□□□ -0.28
NUMB-207ENST00000553997 DNAJC5BQ9UF47 199 aa13.26□□□□□ -0.29
NUMB-207ENST00000553997 NCBP3Q53F19 620 aaKnown RBP13.16□□□□□ -0.3
NUMB-207ENST00000553997 NPM3O75607 178 aaKnown RBP13.04□□□□□ -0.32
NUMB-207ENST00000553997 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13□□□□□ -0.334e-7■□□□□ 9.5
NUMB-207ENST00000553997 RB1CC1Q8TDY2 1594 aa12.91□□□□□ -0.34
NUMB-207ENST00000553997 DCAF8L2P0C7V8 631 aa12.78□□□□□ -0.36
NUMB-207ENST00000553997 U3KPZ7 1027 aaPredicted RBP12.76□□□□□ -0.37
NUMB-207ENST00000553997 NACADO15069 1562 aa12.75□□□□□ -0.37
NUMB-207ENST00000553997 PABPN1Q86U42 306 aaKnown RBP eCLIP12.72□□□□□ -0.37
NUMB-207ENST00000553997 UNC13AQ9UPW8 1703 aa12.65□□□□□ -0.38
NUMB-207ENST00000553997 SPINK5Q9NQ38 1064 aaPredicted RBP12.64□□□□□ -0.39
NUMB-207ENST00000553997 KCNA4P22459 653 aa12.61□□□□□ -0.39
NUMB-207ENST00000553997 DSG3P32926 999 aa12.6□□□□□ -0.39
NUMB-207ENST00000553997 CAPN15O75808 1086 aa12.57□□□□□ -0.4
NUMB-207ENST00000553997 SLC4A2P04920 1241 aa12.54□□□□□ -0.4
NUMB-207ENST00000553997 BICRAQ9NZM4 1560 aa12.52□□□□□ -0.4
NUMB-207ENST00000553997 MYO15BQ96JP2 1530 aa12.47□□□□□ -0.41
NUMB-207ENST00000553997 POTEHQ6S545 545 aa12.36□□□□□ -0.43
NUMB-207ENST00000553997 CC2D2AQ9P2K1 1620 aa12.33□□□□□ -0.43
NUMB-207ENST00000553997 TRHP20396 242 aaPredicted RBP12.33□□□□□ -0.44
NUMB-207ENST00000553997 CECR2Q9BXF3 1484 aa12.33□□□□□ -0.44
NUMB-207ENST00000553997 SCRIBQ14160 1630 aa12.33□□□□□ -0.44
NUMB-207ENST00000553997 ZCCHC6Q5VYS8 1495 aaKnown RBP12.32□□□□□ -0.44
NUMB-207ENST00000553997 SHROOM4Q9ULL8 1493 aa12.29□□□□□ -0.44
NUMB-207ENST00000553997 ABCB7O75027 752 aa12.29□□□□□ -0.44
NUMB-207ENST00000553997 ZNF219Q9P2Y4 722 aaPredicted RBP12.28□□□□□ -0.44
NUMB-207ENST00000553997 APLP2Q06481 763 aa12.27□□□□□ -0.45
NUMB-207ENST00000553997 DCAF1Q9Y4B6 1507 aa12.26□□□□□ -0.45
NUMB-207ENST00000553997 EIF4G1Q04637 1599 aaKnown RBP12.25□□□□□ -0.45
NUMB-207ENST00000553997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.24□□□□□ -0.45
NUMB-207ENST00000553997 HNRNPUL2Q1KMD3 747 aaKnown RBP12.24□□□□□ -0.45
NUMB-207ENST00000553997 SAMD1Q6SPF0 538 aaPredicted RBP12.18□□□□□ -0.46
NUMB-207ENST00000553997 MYCNP04198 464 aaPredicted RBP12.03□□□□□ -0.48
NUMB-207ENST00000553997 DNAJC5Q9H3Z4 198 aa12□□□□□ -0.49
NUMB-207ENST00000553997 POLA2Q14181 598 aa11.97□□□□□ -0.49
NUMB-207ENST00000553997 RBM42Q9BTD8 480 aaKnown RBP11.96□□□□□ -0.49
NUMB-207ENST00000553997 ERCC6Q03468 1493 aa11.85□□□□□ -0.51
NUMB-207ENST00000553997 ATF5Q9Y2D1 282 aaPredicted RBP11.84□□□□□ -0.51
NUMB-207ENST00000553997 SLC4A1APQ9BWU0 796 aaKnown RBP11.82□□□□□ -0.52
NUMB-207ENST00000553997 CUX2O14529 1486 aa11.82□□□□□ -0.52
NUMB-207ENST00000553997 CHRDL2Q6WN34 429 aa11.81□□□□□ -0.52
NUMB-207ENST00000553997 FOXD4L1Q9NU39 408 aa11.8□□□□□ -0.52
NUMB-207ENST00000553997 NCAPD3P42695 1498 aa11.76□□□□□ -0.53
NUMB-207ENST00000553997 ATAD2BQ9ULI0 1458 aa11.72□□□□□ -0.53
NUMB-207ENST00000553997 NESP48681 1621 aa11.7□□□□□ -0.54
NUMB-207ENST00000553997 SMARCA4P51532 1647 aa11.69□□□□□ -0.54
NUMB-207ENST00000553997 SMARCA2P51531 1590 aa11.69□□□□□ -0.54
NUMB-207ENST00000553997 AKT1S1Q96B36 256 aa11.68□□□□□ -0.54
NUMB-207ENST00000553997 HMGXB3Q12766 1538 aa11.67□□□□□ -0.54
NUMB-207ENST00000553997 BAZ1BQ9UIG0 1483 aaKnown RBP11.64□□□□□ -0.55
NUMB-207ENST00000553997 ZBTB12Q9Y330 459 aaPredicted RBP11.64□□□□□ -0.55
NUMB-207ENST00000553997 ZBTB22O15209 634 aa11.63□□□□□ -0.55
NUMB-207ENST00000553997 THOC2Q8NI27 1593 aaKnown RBP11.59□□□□□ -0.55
NUMB-207ENST00000553997 BAZ1AQ9NRL2 1556 aaPredicted RBP11.59□□□□□ -0.55
NUMB-207ENST00000553997 OSCARQ8IYS5 282 aa11.59□□□□□ -0.55
NUMB-207ENST00000553997 REM2Q8IYK8 340 aaPredicted RBP11.58□□□□□ -0.56
NUMB-207ENST00000553997 KIF21AQ7Z4S6 1674 aa11.55□□□□□ -0.56
NUMB-207ENST00000553997 LAMC3Q9Y6N6 1575 aa11.55□□□□□ -0.56
NUMB-207ENST00000553997 PEG3Q9GZU2 1588 aa11.53□□□□□ -0.56
NUMB-207ENST00000553997 PIP4P2Q8N4L2 257 aa11.51□□□□□ -0.57
NUMB-207ENST00000553997 TRIM41Q8WV44 630 aa11.51□□□□□ -0.57
NUMB-207ENST00000553997 MROH2BQ7Z745 1585 aa11.5□□□□□ -0.57
NUMB-207ENST00000553997 PDS5BQ9NTI5 1447 aa11.5□□□□□ -0.57
NUMB-207ENST00000553997 SP7Q8TDD2 431 aaPredicted RBP11.48□□□□□ -0.57
NUMB-207ENST00000553997 PITPNM1O00562 1244 aa11.46□□□□□ -0.57
NUMB-207ENST00000553997 ATXN8OSP0DMR3 200 aa11.46□□□□□ -0.57
NUMB-207ENST00000553997 FXR2P51116 673 aaKnown RBP eCLIP11.42□□□□□ -0.58
NUMB-207ENST00000553997 MRC2Q9UBG0 1479 aa11.42□□□□□ -0.58
NUMB-207ENST00000553997 CADPSQ9ULU8 1353 aa11.41□□□□□ -0.58
NUMB-207ENST00000553997 WIZO95785 1651 aa11.4□□□□□ -0.59
NUMB-207ENST00000553997 WDR62O43379 1518 aa11.39□□□□□ -0.59
NUMB-207ENST00000553997 CEP164Q9UPV0 1460 aa11.35□□□□□ -0.59
NUMB-207ENST00000553997 SPDYE2BA6NHP3 402 aa11.32□□□□□ -0.6
NUMB-207ENST00000553997 HAX1O00165 279 aa11.32□□□□□ -0.6
NUMB-207ENST00000553997 SPDYE6P0CI01 402 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms