RNA–Protein interactions for RNA: ENST00000482777.5

ATXN2-209, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 4,369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-209ENST00000482777 NISCHQ9Y2I1 1504 aa19.82■□□□□ 0.76
ATXN2-209ENST00000482777 DCAF8L2P0C7V8 631 aa19.35■□□□□ 0.69
ATXN2-209ENST00000482777 ABCC9O60706 1549 aa17.77■□□□□ 0.43
ATXN2-209ENST00000482777 SHROOM4Q9ULL8 1493 aa17.61■□□□□ 0.41
ATXN2-209ENST00000482777 SUPT5HO00267 1087 aaKnown RBP17.31■□□□□ 0.36
ATXN2-209ENST00000482777 PABPN1Q86U42 306 aaKnown RBP eCLIP17.23■□□□□ 0.35
ATXN2-209ENST00000482777 CCDC180Q9P1Z9 1646 aa16.83■□□□□ 0.28
ATXN2-209ENST00000482777 RB1CC1Q8TDY2 1594 aa16.59■□□□□ 0.25
ATXN2-209ENST00000482777 FAM9AQ8IZU1 332 aaPredicted RBP16.56■□□□□ 0.24
ATXN2-209ENST00000482777 EHMT2Q96KQ7 1210 aa16.44■□□□□ 0.22
ATXN2-209ENST00000482777 SCRIBQ14160 1630 aa16.43■□□□□ 0.22
ATXN2-209ENST00000482777 NACADO15069 1562 aa16.39■□□□□ 0.21
ATXN2-209ENST00000482777 ZCCHC6Q5VYS8 1495 aaKnown RBP16.32■□□□□ 0.2
ATXN2-209ENST00000482777 TRIM41Q8WV44 630 aa16.18■□□□□ 0.18
ATXN2-209ENST00000482777 RANGAP1P46060 587 aaPredicted RBP16.16■□□□□ 0.18
ATXN2-209ENST00000482777 FBLN2P98095 1184 aa16.09■□□□□ 0.17
ATXN2-209ENST00000482777 TTBK1Q5TCY1 1321 aaPredicted RBP16.07■□□□□ 0.16
ATXN2-209ENST00000482777 ATP1B4Q9UN42 357 aaPredicted RBP16.06■□□□□ 0.16
ATXN2-209ENST00000482777 APLP2Q06481 763 aa16.06■□□□□ 0.16
ATXN2-209ENST00000482777 UBTFP17480 764 aaKnown RBP15.96■□□□□ 0.15
ATXN2-209ENST00000482777 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.88■□□□□ 0.13
ATXN2-209ENST00000482777 HNRNPUL2Q1KMD3 747 aaKnown RBP15.88■□□□□ 0.13
ATXN2-209ENST00000482777 ERCC6Q03468 1493 aa15.87■□□□□ 0.13
ATXN2-209ENST00000482777 DCAF1Q9Y4B6 1507 aa15.86■□□□□ 0.13
ATXN2-209ENST00000482777 CECR2Q9BXF3 1484 aa15.79■□□□□ 0.12
ATXN2-209ENST00000482777 BAZ1BQ9UIG0 1483 aaKnown RBP15.75■□□□□ 0.11
ATXN2-209ENST00000482777 MYO15BQ96JP2 1530 aa15.75■□□□□ 0.11
ATXN2-209ENST00000482777 MYT1LQ9UL68 1186 aa15.75■□□□□ 0.11
ATXN2-209ENST00000482777 CHMP7Q8WUX9 453 aaPredicted RBP15.6■□□□□ 0.09
ATXN2-209ENST00000482777 NPM1P06748 294 aaKnown RBP eCLIP15.58■□□□□ 0.09
ATXN2-209ENST00000482777 BAZ1AQ9NRL2 1556 aaPredicted RBP15.58■□□□□ 0.08
ATXN2-209ENST00000482777 DNAJC5BQ9UF47 199 aa15.57■□□□□ 0.08
ATXN2-209ENST00000482777 PDS5BQ9NTI5 1447 aa15.5■□□□□ 0.07
ATXN2-209ENST00000482777 SMARCA2P51531 1590 aa15.47■□□□□ 0.07
ATXN2-209ENST00000482777 RSF1Q96T23 1441 aaPredicted RBP15.47■□□□□ 0.07
ATXN2-209ENST00000482777 TRHP20396 242 aaPredicted RBP15.36■□□□□ 0.05
ATXN2-209ENST00000482777 CHIC1Q5VXU3 224 aa15.34■□□□□ 0.05
ATXN2-209ENST00000482777 ARID3CA6NKF2 412 aa15.34■□□□□ 0.05
ATXN2-209ENST00000482777 EIF4G1Q04637 1599 aaKnown RBP15.34■□□□□ 0.05
ATXN2-209ENST00000482777 ATAD2BQ9ULI0 1458 aa15.34■□□□□ 0.05
ATXN2-209ENST00000482777 P3H3Q8IVL6 736 aa15.34■□□□□ 0.05
ATXN2-209ENST00000482777 CADPSQ9ULU8 1353 aa15.31■□□□□ 0.04
ATXN2-209ENST00000482777 MROH2BQ7Z745 1585 aa15.29■□□□□ 0.04
ATXN2-209ENST00000482777 CSRNP3Q8WYN3 585 aa15.26■□□□□ 0.03
ATXN2-209ENST00000482777 CC2D2AQ9P2K1 1620 aa15.22■□□□□ 0.03
ATXN2-209ENST00000482777 CDK11AQ9UQ88 783 aaPredicted RBP15.19■□□□□ 0.02
ATXN2-209ENST00000482777 NCAPD3P42695 1498 aa15.17■□□□□ 0.02
ATXN2-209ENST00000482777 OSCARQ8IYS5 282 aa15.17■□□□□ 0.02
ATXN2-209ENST00000482777 CEP164Q9UPV0 1460 aa15.15■□□□□ 0.02
ATXN2-209ENST00000482777 ITGAEP38570 1179 aa15.15■□□□□ 0.02
ATXN2-209ENST00000482777 SMARCA4P51532 1647 aa15.14■□□□□ 0.01
ATXN2-209ENST00000482777 ESF1Q9H501 851 aaKnown RBP15.14■□□□□ 0.01
ATXN2-209ENST00000482777 WRNQ14191 1432 aaPredicted RBP eCLIP15.13■□□□□ 0.01
ATXN2-209ENST00000482777 LOC105371045A0A1W2PR82 267 aa15.12■□□□□ 0.01
ATXN2-209ENST00000482777 PPARGC1BQ86YN6 1023 aaKnown RBP15.11■□□□□ 0.01
ATXN2-209ENST00000482777 TDRD9Q8NDG6 1382 aaKnown RBP15.09■□□□□ 0.01
ATXN2-209ENST00000482777 PLPPR3Q6T4P5 718 aa15.08■□□□□ 0.01
ATXN2-209ENST00000482777 CCDC88BA6NC98 1476 aa15.08■□□□□ 0
ATXN2-209ENST00000482777 SOGA1O94964 1423 aa15.07■□□□□ 0
ATXN2-209ENST00000482777 BICRAQ9NZM4 1560 aa15.07■□□□□ 0
ATXN2-209ENST00000482777 FANCD2Q9BXW9 1451 aa15.06■□□□□ 0
ATXN2-209ENST00000482777 KCNH8Q96L42 1107 aa15.06■□□□□ 0
ATXN2-209ENST00000482777 ZNF777Q9ULD5 760 aaPredicted RBP15.05■□□□□ 0
ATXN2-209ENST00000482777 CYB5RLQ6IPT4 315 aa15.04■□□□□ -0
ATXN2-209ENST00000482777 KIF27Q86VH2 1401 aa15.03■□□□□ -0
ATXN2-209ENST00000482777 WIZO95785 1651 aa15□□□□□ -0.01
ATXN2-209ENST00000482777 TOP2AP11388 1531 aaKnown RBP14.99□□□□□ -0.01
ATXN2-209ENST00000482777 CUX2O14529 1486 aa14.98□□□□□ -0.01
ATXN2-209ENST00000482777 FAM50AQ14320 339 aaKnown RBP14.98□□□□□ -0.01
ATXN2-209ENST00000482777 NESP48681 1621 aa14.95□□□□□ -0.02
ATXN2-209ENST00000482777 PLEKHD1A6NEE1 506 aa14.93□□□□□ -0.02
ATXN2-209ENST00000482777 ABCC8Q09428 1581 aa14.92□□□□□ -0.02
ATXN2-209ENST00000482777 ARID4BQ4LE39 1312 aaPredicted RBP14.9□□□□□ -0.02
ATXN2-209ENST00000482777 BCANQ96GW7 911 aa14.87□□□□□ -0.03
ATXN2-209ENST00000482777 CARMIL1Q5VZK9 1371 aa14.86□□□□□ -0.03
ATXN2-209ENST00000482777 PCGF6Q9BYE7 350 aa14.86□□□□□ -0.03
ATXN2-209ENST00000482777 HMGXB3Q12766 1538 aa14.84□□□□□ -0.03
ATXN2-209ENST00000482777 MRC2Q9UBG0 1479 aa14.83□□□□□ -0.04
ATXN2-209ENST00000482777 CARMIL2Q6F5E8 1435 aa14.82□□□□□ -0.04
ATXN2-209ENST00000482777 JPH4Q96JJ6 628 aa14.81□□□□□ -0.04
ATXN2-209ENST00000482777 TRIM52Q96A61 297 aa14.81□□□□□ -0.04
ATXN2-209ENST00000482777 STAG3Q9UJ98 1225 aa14.78□□□□□ -0.04
ATXN2-209ENST00000482777 AEBP2Q6ZN18 517 aaPredicted RBP14.77□□□□□ -0.05
ATXN2-209ENST00000482777 TSPY4P0CV99 314 aa14.75□□□□□ -0.05
ATXN2-209ENST00000482777 TSPY10P0CW01 314 aa14.75□□□□□ -0.05
ATXN2-209ENST00000482777 EEA1Q15075 1411 aa14.74□□□□□ -0.05
ATXN2-209ENST00000482777 UNC13AQ9UPW8 1703 aa14.74□□□□□ -0.05
ATXN2-209ENST00000482777 CFTRP13569 1480 aa14.73□□□□□ -0.05
ATXN2-209ENST00000482777 AQRO60306 1485 aaKnown RBP eCLIP14.72□□□□□ -0.051e-6■■■■□ 24.7
ATXN2-209ENST00000482777 MTUS2Q5JR59 1369 aa14.72□□□□□ -0.05
ATXN2-209ENST00000482777 CCER1Q8TC90 406 aaPredicted RBP14.69□□□□□ -0.06
ATXN2-209ENST00000482777 RAD54L2Q9Y4B4 1467 aa14.68□□□□□ -0.06
ATXN2-209ENST00000482777 LAMC3Q9Y6N6 1575 aa14.67□□□□□ -0.06
ATXN2-209ENST00000482777 GAPVD1Q14C86 1478 aa14.66□□□□□ -0.06
ATXN2-209ENST00000482777 FGD5Q6ZNL6 1462 aa14.66□□□□□ -0.06
ATXN2-209ENST00000482777 IFT140Q96RY7 1462 aa14.66□□□□□ -0.06
ATXN2-209ENST00000482777 CHGAP10645 457 aaKnown RBP14.66□□□□□ -0.06
ATXN2-209ENST00000482777 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.63□□□□□ -0.073e-9■□□□□ 11.2
ATXN2-209ENST00000482777 MLECQ14165 292 aa14.62□□□□□ -0.07
ATXN2-209ENST00000482777 FAM69CQ0P6D2 419 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms