Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AC019069.1-201ENST00000610008 1333 ntBASIC18.9■□□□□ 0.62
RLIMQ9NVW2 RBM17P2-201ENST00000616397 1405 ntBASIC18.9■□□□□ 0.62
RLIMQ9NVW2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RLIMQ9NVW2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RLIMQ9NVW2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
RLIMQ9NVW2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.9■□□□□ 0.62
RLIMQ9NVW2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RLIMQ9NVW2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RLIMQ9NVW2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
RLIMQ9NVW2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
RLIMQ9NVW2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RLIMQ9NVW2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.89■□□□□ 0.61
RLIMQ9NVW2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
RLIMQ9NVW2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
RLIMQ9NVW2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RLIMQ9NVW2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RLIMQ9NVW2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RLIMQ9NVW2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RLIMQ9NVW2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.89■□□□□ 0.61
RLIMQ9NVW2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.89■□□□□ 0.61
RLIMQ9NVW2 UBE2DNL-204ENST00000602536 740 ntBASIC18.89■□□□□ 0.61
RLIMQ9NVW2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.89■□□□□ 0.61
RLIMQ9NVW2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RLIMQ9NVW2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RLIMQ9NVW2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.89■□□□□ 0.61
RLIMQ9NVW2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
RLIMQ9NVW2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RLIMQ9NVW2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RLIMQ9NVW2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RLIMQ9NVW2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RLIMQ9NVW2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RLIMQ9NVW2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 AC034268.1-201ENST00000441047 882 ntBASIC18.88■□□□□ 0.61
RLIMQ9NVW2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RLIMQ9NVW2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RLIMQ9NVW2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RLIMQ9NVW2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RLIMQ9NVW2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.87■□□□□ 0.61
RLIMQ9NVW2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RLIMQ9NVW2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RLIMQ9NVW2 AC091799.1-201ENST00000422823 811 ntBASIC18.87■□□□□ 0.61
RLIMQ9NVW2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.87■□□□□ 0.61
RLIMQ9NVW2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RLIMQ9NVW2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RLIMQ9NVW2 SLC7A5P1-201ENST00000568957 537 ntBASIC18.87■□□□□ 0.61
RLIMQ9NVW2 MIR6821-201ENST00000617625 74 ntBASIC18.87■□□□□ 0.61
RLIMQ9NVW2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RLIMQ9NVW2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RLIMQ9NVW2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RLIMQ9NVW2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RLIMQ9NVW2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RLIMQ9NVW2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.86■□□□□ 0.61
RLIMQ9NVW2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.86■□□□□ 0.61
RLIMQ9NVW2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
RLIMQ9NVW2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RLIMQ9NVW2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RLIMQ9NVW2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RLIMQ9NVW2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RLIMQ9NVW2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RLIMQ9NVW2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RLIMQ9NVW2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RLIMQ9NVW2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.86■□□□□ 0.61
RLIMQ9NVW2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.86■□□□□ 0.61
RLIMQ9NVW2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RLIMQ9NVW2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RLIMQ9NVW2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RLIMQ9NVW2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.86■□□□□ 0.61
RLIMQ9NVW2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RLIMQ9NVW2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RLIMQ9NVW2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RLIMQ9NVW2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms