Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
KCNF1Q9H3M0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
KCNF1Q9H3M0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
KCNF1Q9H3M0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.17■■□□□ 1.14
KCNF1Q9H3M0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
KCNF1Q9H3M0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
KCNF1Q9H3M0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
KCNF1Q9H3M0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
KCNF1Q9H3M0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.17■■□□□ 1.14
KCNF1Q9H3M0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.17■■□□□ 1.14
KCNF1Q9H3M0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
KCNF1Q9H3M0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC22.17■■□□□ 1.14
KCNF1Q9H3M0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
KCNF1Q9H3M0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
KCNF1Q9H3M0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
KCNF1Q9H3M0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
KCNF1Q9H3M0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
KCNF1Q9H3M0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
KCNF1Q9H3M0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
KCNF1Q9H3M0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
KCNF1Q9H3M0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
KCNF1Q9H3M0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
KCNF1Q9H3M0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.16■■□□□ 1.14
KCNF1Q9H3M0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.16■■□□□ 1.14
KCNF1Q9H3M0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.16■■□□□ 1.14
KCNF1Q9H3M0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
KCNF1Q9H3M0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
KCNF1Q9H3M0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC22.16■■□□□ 1.14
KCNF1Q9H3M0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.16■■□□□ 1.14
KCNF1Q9H3M0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
KCNF1Q9H3M0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
KCNF1Q9H3M0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.16■■□□□ 1.14
KCNF1Q9H3M0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
KCNF1Q9H3M0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC22.16■■□□□ 1.14
KCNF1Q9H3M0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
KCNF1Q9H3M0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
KCNF1Q9H3M0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
KCNF1Q9H3M0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
KCNF1Q9H3M0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.15■■□□□ 1.14
KCNF1Q9H3M0 SERBP1P1-201ENST00000396021 1160 ntBASIC22.15■■□□□ 1.14
KCNF1Q9H3M0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.15■■□□□ 1.14
KCNF1Q9H3M0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.15■■□□□ 1.14
KCNF1Q9H3M0 MIR2861-201ENST00000636310 90 ntBASIC22.15■■□□□ 1.14
KCNF1Q9H3M0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
KCNF1Q9H3M0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC22.15■■□□□ 1.14
KCNF1Q9H3M0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
KCNF1Q9H3M0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.14■■□□□ 1.14
KCNF1Q9H3M0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
KCNF1Q9H3M0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
KCNF1Q9H3M0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
KCNF1Q9H3M0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
KCNF1Q9H3M0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
KCNF1Q9H3M0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
KCNF1Q9H3M0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.14■■□□□ 1.13
KCNF1Q9H3M0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
KCNF1Q9H3M0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
KCNF1Q9H3M0 AL049812.1-201ENST00000432563 2267 ntBASIC22.14■■□□□ 1.13
KCNF1Q9H3M0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.14■■□□□ 1.13
KCNF1Q9H3M0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22.14■■□□□ 1.13
KCNF1Q9H3M0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
KCNF1Q9H3M0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.14■■□□□ 1.13
KCNF1Q9H3M0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
KCNF1Q9H3M0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC22.14■■□□□ 1.13
KCNF1Q9H3M0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
KCNF1Q9H3M0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
KCNF1Q9H3M0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
KCNF1Q9H3M0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
KCNF1Q9H3M0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
KCNF1Q9H3M0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
KCNF1Q9H3M0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
KCNF1Q9H3M0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC22.13■■□□□ 1.13
KCNF1Q9H3M0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC22.13■■□□□ 1.13
KCNF1Q9H3M0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
KCNF1Q9H3M0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
KCNF1Q9H3M0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.13■■□□□ 1.13
KCNF1Q9H3M0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
KCNF1Q9H3M0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
KCNF1Q9H3M0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
KCNF1Q9H3M0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
KCNF1Q9H3M0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC22.12■■□□□ 1.13
KCNF1Q9H3M0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.12■■□□□ 1.13
KCNF1Q9H3M0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
KCNF1Q9H3M0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
KCNF1Q9H3M0 AC005332.8-201ENST00000622750 2735 ntBASIC22.12■■□□□ 1.13
KCNF1Q9H3M0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
KCNF1Q9H3M0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
KCNF1Q9H3M0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.12■■□□□ 1.13
KCNF1Q9H3M0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.12■■□□□ 1.13
KCNF1Q9H3M0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
KCNF1Q9H3M0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
KCNF1Q9H3M0 AC009237.3-201ENST00000393279 1427 ntBASIC22.12■■□□□ 1.13
KCNF1Q9H3M0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
KCNF1Q9H3M0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
KCNF1Q9H3M0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.11■■□□□ 1.13
KCNF1Q9H3M0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
KCNF1Q9H3M0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
KCNF1Q9H3M0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC22.11■■□□□ 1.13
KCNF1Q9H3M0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KCNF1Q9H3M0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KCNF1Q9H3M0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms