Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.13■□□□□ 0.65
NR1H4Q96RI1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
NR1H4Q96RI1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.13■□□□□ 0.65
NR1H4Q96RI1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NR1H4Q96RI1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.13■□□□□ 0.65
NR1H4Q96RI1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NR1H4Q96RI1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.13■□□□□ 0.65
NR1H4Q96RI1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.13■□□□□ 0.65
NR1H4Q96RI1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NR1H4Q96RI1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NR1H4Q96RI1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NR1H4Q96RI1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 AL031602.1-201ENST00000633169 911 ntBASIC19.12■□□□□ 0.65
NR1H4Q96RI1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NR1H4Q96RI1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.11■□□□□ 0.65
NR1H4Q96RI1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NR1H4Q96RI1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR1H4Q96RI1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NR1H4Q96RI1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR1H4Q96RI1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
NR1H4Q96RI1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.11■□□□□ 0.65
NR1H4Q96RI1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR1H4Q96RI1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.11■□□□□ 0.65
NR1H4Q96RI1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR1H4Q96RI1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.11■□□□□ 0.65
NR1H4Q96RI1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR1H4Q96RI1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR1H4Q96RI1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR1H4Q96RI1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NR1H4Q96RI1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NR1H4Q96RI1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.1■□□□□ 0.65
NR1H4Q96RI1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NR1H4Q96RI1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NR1H4Q96RI1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NR1H4Q96RI1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.1■□□□□ 0.65
NR1H4Q96RI1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NR1H4Q96RI1 AC103834.1-201ENST00000520383 144 ntBASIC19.1■□□□□ 0.65
NR1H4Q96RI1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.1■□□□□ 0.65
NR1H4Q96RI1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NR1H4Q96RI1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NR1H4Q96RI1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.1■□□□□ 0.65
NR1H4Q96RI1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NR1H4Q96RI1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NR1H4Q96RI1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NR1H4Q96RI1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NR1H4Q96RI1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.1■□□□□ 0.65
NR1H4Q96RI1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
NR1H4Q96RI1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NR1H4Q96RI1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NR1H4Q96RI1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.09■□□□□ 0.65
NR1H4Q96RI1 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.09■□□□□ 0.65
NR1H4Q96RI1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NR1H4Q96RI1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NR1H4Q96RI1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
NR1H4Q96RI1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
NR1H4Q96RI1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
NR1H4Q96RI1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NR1H4Q96RI1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.09■□□□□ 0.65
NR1H4Q96RI1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NR1H4Q96RI1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NR1H4Q96RI1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NR1H4Q96RI1 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
NR1H4Q96RI1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NR1H4Q96RI1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NR1H4Q96RI1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NR1H4Q96RI1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NR1H4Q96RI1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NR1H4Q96RI1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.09■□□□□ 0.65
NR1H4Q96RI1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NR1H4Q96RI1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.08■□□□□ 0.65
NR1H4Q96RI1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NR1H4Q96RI1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.08■□□□□ 0.65
NR1H4Q96RI1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NR1H4Q96RI1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NR1H4Q96RI1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms