Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 BHLHE23-202ENST00000612929 1109 ntBASIC19.81■□□□□ 0.76
RAB3IPQ96QF0 AC074183.2-201ENST00000623112 922 ntBASIC19.81■□□□□ 0.76
RAB3IPQ96QF0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3IPQ96QF0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RAB3IPQ96QF0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3IPQ96QF0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3IPQ96QF0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3IPQ96QF0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3IPQ96QF0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3IPQ96QF0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3IPQ96QF0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3IPQ96QF0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3IPQ96QF0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3IPQ96QF0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3IPQ96QF0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3IPQ96QF0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.8■□□□□ 0.76
RAB3IPQ96QF0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3IPQ96QF0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3IPQ96QF0 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.8■□□□□ 0.76
RAB3IPQ96QF0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3IPQ96QF0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.8■□□□□ 0.76
RAB3IPQ96QF0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3IPQ96QF0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.8■□□□□ 0.76
RAB3IPQ96QF0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3IPQ96QF0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.79■□□□□ 0.76
RAB3IPQ96QF0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.79■□□□□ 0.76
RAB3IPQ96QF0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3IPQ96QF0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3IPQ96QF0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3IPQ96QF0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3IPQ96QF0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3IPQ96QF0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.79■□□□□ 0.76
RAB3IPQ96QF0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3IPQ96QF0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.79■□□□□ 0.76
RAB3IPQ96QF0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3IPQ96QF0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RAB3IPQ96QF0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.79■□□□□ 0.76
RAB3IPQ96QF0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.79■□□□□ 0.76
RAB3IPQ96QF0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RAB3IPQ96QF0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RAB3IPQ96QF0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3IPQ96QF0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3IPQ96QF0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3IPQ96QF0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.79■□□□□ 0.76
RAB3IPQ96QF0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.79■□□□□ 0.76
RAB3IPQ96QF0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.79■□□□□ 0.76
RAB3IPQ96QF0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3IPQ96QF0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
RAB3IPQ96QF0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB3IPQ96QF0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB3IPQ96QF0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB3IPQ96QF0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB3IPQ96QF0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RAB3IPQ96QF0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB3IPQ96QF0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB3IPQ96QF0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.78■□□□□ 0.76
RAB3IPQ96QF0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB3IPQ96QF0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAB3IPQ96QF0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB3IPQ96QF0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAB3IPQ96QF0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.78■□□□□ 0.76
RAB3IPQ96QF0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB3IPQ96QF0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB3IPQ96QF0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAB3IPQ96QF0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.77■□□□□ 0.76
RAB3IPQ96QF0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAB3IPQ96QF0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
RAB3IPQ96QF0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.77■□□□□ 0.76
RAB3IPQ96QF0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RAB3IPQ96QF0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RAB3IPQ96QF0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB3IPQ96QF0 AC010141.3-201ENST00000456659 717 ntBASIC19.77■□□□□ 0.76
RAB3IPQ96QF0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.77■□□□□ 0.76
RAB3IPQ96QF0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.77■□□□□ 0.76
RAB3IPQ96QF0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.77■□□□□ 0.76
RAB3IPQ96QF0 Z92544.1-202ENST00000571933 1220 ntBASIC19.77■□□□□ 0.76
RAB3IPQ96QF0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB3IPQ96QF0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.77■□□□□ 0.76
RAB3IPQ96QF0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.77■□□□□ 0.76
RAB3IPQ96QF0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB3IPQ96QF0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB3IPQ96QF0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.77■□□□□ 0.76
RAB3IPQ96QF0 Z82202.1-201ENST00000623446 1880 ntBASIC19.77■□□□□ 0.76
RAB3IPQ96QF0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.77■□□□□ 0.75
RAB3IPQ96QF0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.77■□□□□ 0.75
RAB3IPQ96QF0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB3IPQ96QF0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RAB3IPQ96QF0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAB3IPQ96QF0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.76■□□□□ 0.75
RAB3IPQ96QF0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB3IPQ96QF0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
RAB3IPQ96QF0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.76■□□□□ 0.75
RAB3IPQ96QF0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RAB3IPQ96QF0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB3IPQ96QF0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.76■□□□□ 0.75
RAB3IPQ96QF0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.76■□□□□ 0.75
RAB3IPQ96QF0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB3IPQ96QF0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB3IPQ96QF0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB3IPQ96QF0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms