Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LRRC28Q86X40 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC28Q86X40 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.02■□□□□ 0.48
LRRC28Q86X40 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC28Q86X40 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC28Q86X40 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC28Q86X40 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
LRRC28Q86X40 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC28Q86X40 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC28Q86X40 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
LRRC28Q86X40 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC28Q86X40 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.02■□□□□ 0.48
LRRC28Q86X40 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.02■□□□□ 0.48
LRRC28Q86X40 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.02■□□□□ 0.48
LRRC28Q86X40 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC28Q86X40 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC28Q86X40 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRRC28Q86X40 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LRRC28Q86X40 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
LRRC28Q86X40 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.02■□□□□ 0.47
LRRC28Q86X40 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRRC28Q86X40 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.02■□□□□ 0.47
LRRC28Q86X40 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRRC28Q86X40 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC28Q86X40 AC098818.2-201ENST00000564925 2320 ntBASIC18.01■□□□□ 0.47
LRRC28Q86X40 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.01■□□□□ 0.47
LRRC28Q86X40 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC28Q86X40 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
LRRC28Q86X40 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
LRRC28Q86X40 AC116562.4-201ENST00000641316 2276 ntBASIC18.01■□□□□ 0.47
LRRC28Q86X40 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.01■□□□□ 0.47
LRRC28Q86X40 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.01■□□□□ 0.47
LRRC28Q86X40 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC28Q86X40 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC28Q86X40 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC28Q86X40 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC28Q86X40 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.01■□□□□ 0.47
LRRC28Q86X40 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.01■□□□□ 0.47
LRRC28Q86X40 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.01■□□□□ 0.47
LRRC28Q86X40 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.01■□□□□ 0.47
LRRC28Q86X40 AC005224.4-201ENST00000583262 1652 ntBASIC18.01■□□□□ 0.47
LRRC28Q86X40 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.01■□□□□ 0.47
LRRC28Q86X40 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
LRRC28Q86X40 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
LRRC28Q86X40 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC28Q86X40 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC28Q86X40 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.01■□□□□ 0.47
LRRC28Q86X40 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC28Q86X40 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC28Q86X40 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
LRRC28Q86X40 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC28Q86X40 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC28Q86X40 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.01■□□□□ 0.47
LRRC28Q86X40 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC28Q86X40 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC28Q86X40 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18■□□□□ 0.47
LRRC28Q86X40 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC28Q86X40 AP004607.7-201ENST00000527152 1677 ntBASIC18■□□□□ 0.47
LRRC28Q86X40 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC28Q86X40 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18■□□□□ 0.47
LRRC28Q86X40 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC28Q86X40 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC28Q86X40 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
LRRC28Q86X40 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC28Q86X40 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRRC28Q86X40 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRRC28Q86X40 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18■□□□□ 0.47
LRRC28Q86X40 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC28Q86X40 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18■□□□□ 0.47
LRRC28Q86X40 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRRC28Q86X40 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC28Q86X40 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC28Q86X40 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRRC28Q86X40 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC28Q86X40 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC28Q86X40 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC28Q86X40 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
LRRC28Q86X40 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.99■□□□□ 0.47
LRRC28Q86X40 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC28Q86X40 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.99■□□□□ 0.47
LRRC28Q86X40 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.99■□□□□ 0.47
LRRC28Q86X40 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC28Q86X40 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.99■□□□□ 0.47
LRRC28Q86X40 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC28Q86X40 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC28Q86X40 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.99■□□□□ 0.47
LRRC28Q86X40 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.99■□□□□ 0.47
LRRC28Q86X40 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
LRRC28Q86X40 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC28Q86X40 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC28Q86X40 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC28Q86X40 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC28Q86X40 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
LRRC28Q86X40 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC28Q86X40 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.99■□□□□ 0.47
LRRC28Q86X40 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC28Q86X40 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC28Q86X40 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC28Q86X40 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC28Q86X40 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms