Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC10.93□□□□□ -0.66
LCA10Q71F78 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
LCA10Q71F78 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
LCA10Q71F78 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
LCA10Q71F78 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC10.93□□□□□ -0.66
LCA10Q71F78 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LCA10Q71F78 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LCA10Q71F78 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LCA10Q71F78 AC087742.1-201ENST00000575880 1738 ntBASIC10.92□□□□□ -0.66
LCA10Q71F78 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
LCA10Q71F78 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LCA10Q71F78 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LCA10Q71F78 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LCA10Q71F78 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LCA10Q71F78 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LCA10Q71F78 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
LCA10Q71F78 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LCA10Q71F78 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC10.92□□□□□ -0.66
LCA10Q71F78 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
LCA10Q71F78 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LCA10Q71F78 TSPY13P-201ENST00000338964 914 ntBASIC10.92□□□□□ -0.66
LCA10Q71F78 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC10.92□□□□□ -0.66
LCA10Q71F78 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC10.92□□□□□ -0.66
LCA10Q71F78 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
LCA10Q71F78 SNX5-217ENST00000606557 1087 ntBASIC10.92□□□□□ -0.66
LCA10Q71F78 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LCA10Q71F78 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC10.92□□□□□ -0.66
LCA10Q71F78 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC10.92□□□□□ -0.66
LCA10Q71F78 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC10.92□□□□□ -0.66
LCA10Q71F78 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
LCA10Q71F78 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LCA10Q71F78 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
LCA10Q71F78 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LCA10Q71F78 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC10.92□□□□□ -0.66
LCA10Q71F78 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
LCA10Q71F78 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LCA10Q71F78 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LCA10Q71F78 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LCA10Q71F78 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LCA10Q71F78 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC10.92□□□□□ -0.66
LCA10Q71F78 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC10.92□□□□□ -0.66
LCA10Q71F78 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LCA10Q71F78 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LCA10Q71F78 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LCA10Q71F78 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC10.92□□□□□ -0.66
LCA10Q71F78 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
LCA10Q71F78 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LCA10Q71F78 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LCA10Q71F78 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LCA10Q71F78 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LCA10Q71F78 AC046158.3-201ENST00000624947 2558 ntBASIC10.91□□□□□ -0.66
LCA10Q71F78 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
LCA10Q71F78 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LCA10Q71F78 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LCA10Q71F78 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LCA10Q71F78 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LCA10Q71F78 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
LCA10Q71F78 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC10.91□□□□□ -0.66
LCA10Q71F78 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
LCA10Q71F78 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC10.91□□□□□ -0.66
LCA10Q71F78 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LCA10Q71F78 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
LCA10Q71F78 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC10.91□□□□□ -0.66
LCA10Q71F78 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC10.91□□□□□ -0.66
LCA10Q71F78 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LCA10Q71F78 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC10.91□□□□□ -0.66
LCA10Q71F78 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC10.91□□□□□ -0.66
LCA10Q71F78 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC10.91□□□□□ -0.66
LCA10Q71F78 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
LCA10Q71F78 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LCA10Q71F78 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC10.91□□□□□ -0.66
LCA10Q71F78 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LCA10Q71F78 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LCA10Q71F78 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LCA10Q71F78 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LCA10Q71F78 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
LCA10Q71F78 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LCA10Q71F78 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LCA10Q71F78 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC10.91□□□□□ -0.66
LCA10Q71F78 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC10.91□□□□□ -0.66
LCA10Q71F78 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LCA10Q71F78 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LCA10Q71F78 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LCA10Q71F78 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
LCA10Q71F78 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC10.9□□□□□ -0.66
LCA10Q71F78 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LCA10Q71F78 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LCA10Q71F78 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LCA10Q71F78 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC10.9□□□□□ -0.66
LCA10Q71F78 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC10.9□□□□□ -0.66
LCA10Q71F78 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LCA10Q71F78 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LCA10Q71F78 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms