Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.48■□□□□ 0.55
TMEM53Q6P2H8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TMEM53Q6P2H8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM53Q6P2H8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM53Q6P2H8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.48■□□□□ 0.55
TMEM53Q6P2H8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.48■□□□□ 0.55
TMEM53Q6P2H8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TMEM53Q6P2H8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.48■□□□□ 0.55
TMEM53Q6P2H8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM53Q6P2H8 AC244015.2-201ENST00000616358 1861 ntBASIC18.48■□□□□ 0.55
TMEM53Q6P2H8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM53Q6P2H8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.48■□□□□ 0.55
TMEM53Q6P2H8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 AC053503.5-201ENST00000601508 636 ntBASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM53Q6P2H8 FEM1AP1-201ENST00000431297 1995 ntBASIC18.46■□□□□ 0.55
TMEM53Q6P2H8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.46■□□□□ 0.55
TMEM53Q6P2H8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM53Q6P2H8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM53Q6P2H8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.46■□□□□ 0.55
TMEM53Q6P2H8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM53Q6P2H8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TMEM53Q6P2H8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.46■□□□□ 0.55
TMEM53Q6P2H8 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.46■□□□□ 0.55
TMEM53Q6P2H8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.46■□□□□ 0.55
TMEM53Q6P2H8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.46■□□□□ 0.55
TMEM53Q6P2H8 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.46■□□□□ 0.55
TMEM53Q6P2H8 AC087623.3-201ENST00000607047 1098 ntBASIC18.46■□□□□ 0.55
TMEM53Q6P2H8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.46■□□□□ 0.55
TMEM53Q6P2H8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.46■□□□□ 0.55
TMEM53Q6P2H8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM53Q6P2H8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM53Q6P2H8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TMEM53Q6P2H8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TMEM53Q6P2H8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TMEM53Q6P2H8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.46■□□□□ 0.54
TMEM53Q6P2H8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TMEM53Q6P2H8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 EEF1DP3-203ENST00000566025 782 ntBASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 PCDHAC2-203ENST00000615316 3011 ntBASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM53Q6P2H8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM53Q6P2H8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms