Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.05■□□□□ 0.8
LYSMD4Q5XG99 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LYSMD4Q5XG99 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
LYSMD4Q5XG99 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LYSMD4Q5XG99 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.05■□□□□ 0.8
LYSMD4Q5XG99 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.05■□□□□ 0.8
LYSMD4Q5XG99 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LYSMD4Q5XG99 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LYSMD4Q5XG99 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
LYSMD4Q5XG99 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LYSMD4Q5XG99 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LYSMD4Q5XG99 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
LYSMD4Q5XG99 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
LYSMD4Q5XG99 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LYSMD4Q5XG99 FAM197Y1-201ENST00000421178 764 ntBASIC20.04■□□□□ 0.8
LYSMD4Q5XG99 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.04■□□□□ 0.8
LYSMD4Q5XG99 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LYSMD4Q5XG99 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.04■□□□□ 0.8
LYSMD4Q5XG99 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LYSMD4Q5XG99 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.04■□□□□ 0.8
LYSMD4Q5XG99 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LYSMD4Q5XG99 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.04■□□□□ 0.8
LYSMD4Q5XG99 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.04■□□□□ 0.8
LYSMD4Q5XG99 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
LYSMD4Q5XG99 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LYSMD4Q5XG99 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LYSMD4Q5XG99 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.04■□□□□ 0.8
LYSMD4Q5XG99 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD4Q5XG99 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.03■□□□□ 0.8
LYSMD4Q5XG99 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.03■□□□□ 0.8
LYSMD4Q5XG99 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD4Q5XG99 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
LYSMD4Q5XG99 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD4Q5XG99 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
LYSMD4Q5XG99 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD4Q5XG99 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.03■□□□□ 0.8
LYSMD4Q5XG99 AC023632.3-201ENST00000521633 145 ntBASIC20.03■□□□□ 0.8
LYSMD4Q5XG99 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.03■□□□□ 0.8
LYSMD4Q5XG99 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
LYSMD4Q5XG99 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.03■□□□□ 0.8
LYSMD4Q5XG99 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
LYSMD4Q5XG99 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.03■□□□□ 0.8
LYSMD4Q5XG99 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.03■□□□□ 0.8
LYSMD4Q5XG99 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.03■□□□□ 0.8
LYSMD4Q5XG99 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD4Q5XG99 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.03■□□□□ 0.8
LYSMD4Q5XG99 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD4Q5XG99 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD4Q5XG99 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LYSMD4Q5XG99 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.02■□□□□ 0.8
LYSMD4Q5XG99 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LYSMD4Q5XG99 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LYSMD4Q5XG99 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.02■□□□□ 0.8
LYSMD4Q5XG99 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.02■□□□□ 0.8
LYSMD4Q5XG99 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LYSMD4Q5XG99 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.02■□□□□ 0.8
LYSMD4Q5XG99 AC073195.1-201ENST00000607241 877 ntBASIC20.02■□□□□ 0.8
LYSMD4Q5XG99 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LYSMD4Q5XG99 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LYSMD4Q5XG99 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LYSMD4Q5XG99 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
LYSMD4Q5XG99 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LYSMD4Q5XG99 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LYSMD4Q5XG99 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.02■□□□□ 0.79
LYSMD4Q5XG99 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD4Q5XG99 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD4Q5XG99 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD4Q5XG99 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD4Q5XG99 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.01■□□□□ 0.79
LYSMD4Q5XG99 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.01■□□□□ 0.79
LYSMD4Q5XG99 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.01■□□□□ 0.79
LYSMD4Q5XG99 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD4Q5XG99 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD4Q5XG99 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD4Q5XG99 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD4Q5XG99 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD4Q5XG99 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD4Q5XG99 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD4Q5XG99 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
LYSMD4Q5XG99 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LYSMD4Q5XG99 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LYSMD4Q5XG99 AC242852.2-201ENST00000615738 1807 ntBASIC20■□□□□ 0.79
LYSMD4Q5XG99 AC124283.5-201ENST00000624661 1809 ntBASIC20■□□□□ 0.79
LYSMD4Q5XG99 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LYSMD4Q5XG99 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LYSMD4Q5XG99 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LYSMD4Q5XG99 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20■□□□□ 0.79
LYSMD4Q5XG99 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20■□□□□ 0.79
LYSMD4Q5XG99 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20■□□□□ 0.79
LYSMD4Q5XG99 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LYSMD4Q5XG99 KRT18P35-201ENST00000510488 1269 ntBASIC20■□□□□ 0.79
LYSMD4Q5XG99 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20■□□□□ 0.79
LYSMD4Q5XG99 AC004264.1-201ENST00000608354 794 ntBASIC20■□□□□ 0.79
LYSMD4Q5XG99 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20■□□□□ 0.79
LYSMD4Q5XG99 AL121906.2-201ENST00000621597 723 ntBASIC20■□□□□ 0.79
LYSMD4Q5XG99 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20■□□□□ 0.79
LYSMD4Q5XG99 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20■□□□□ 0.79
LYSMD4Q5XG99 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LYSMD4Q5XG99 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20■□□□□ 0.79
LYSMD4Q5XG99 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms