Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 CCNL2-204ENST00000418865 3082 ntTSL 1 (best)8.55□□□□□ -1.044e-8■■■□□ 14.9
SRSF1Q07955 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.69■■□□□ 1.869e-8■■■□□ 14.9
SRSF1Q07955 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.69■■□□□ 1.869e-8■■■□□ 14.9
SRSF1Q07955 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.31■□□□□ 0.689e-8■■■□□ 14.9
SRSF1Q07955 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.36■□□□□ 0.379e-8■■■□□ 14.9
SRSF1Q07955 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.25□□□□□ -0.293e-8■■■□□ 14.9
SRSF1Q07955 EXOC7-203ENST00000357231 1924 ntTSL 1 (best)10.55□□□□□ -0.723e-8■■■□□ 14.9
SRSF1Q07955 EXOC7-205ENST00000405575 2208 ntTSL 5 BASIC10.41□□□□□ -0.743e-8■■■□□ 14.9
SRSF1Q07955 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.783e-8■■■□□ 14.9
SRSF1Q07955 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.843e-8■■■□□ 14.9
SRSF1Q07955 EXOC7-201ENST00000332065 4596 ntAPPRIS P3 TSL 2 BASIC9.08□□□□□ -0.963e-8■■■□□ 14.9
SRSF1Q07955 EXOC7-221ENST00000634349 2124 ntTSL 1 (best) BASIC8.86□□□□□ -0.993e-8■■■□□ 14.9
SRSF1Q07955 EXOC7-202ENST00000335146 3519 ntTSL 1 (best) BASIC8.33□□□□□ -1.083e-8■■■□□ 14.9
SRSF1Q07955 EXOC7-220ENST00000607838 3353 ntTSL 5 BASIC7.66□□□□□ -1.183e-8■■■□□ 14.9
SRSF1Q07955 HSP90AA1-203ENST00000553585 581 ntTSL 36.15□□□□□ -1.425e-15■■■□□ 14.9
SRSF1Q07955 HSP90AA1-205ENST00000555662 429 ntTSL 26□□□□□ -1.455e-15■■■□□ 14.9
SRSF1Q07955 PDIA4-202ENST00000413966 550 ntTSL 217.98■□□□□ 0.479e-18■■■□□ 14.9
SRSF1Q07955 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.499e-18■■■□□ 14.9
SRSF1Q07955 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.3■□□□□ 0.523e-8■■■□□ 14.9
SRSF1Q07955 GOLGA4-209ENST00000450863 1617 ntTSL 518.25■□□□□ 0.513e-8■■■□□ 14.9
SRSF1Q07955 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.43■□□□□ 0.382e-8■■■□□ 14.9
SRSF1Q07955 ATF5-203ENST00000596658 722 ntTSL 216.85■□□□□ 0.292e-6■■■□□ 14.9
SRSF1Q07955 ARFGAP1-213ENST00000520022 558 ntTSL 416.79■□□□□ 0.281e-7■■■□□ 14.9
SRSF1Q07955 ATF5-204ENST00000597227 828 ntTSL 316.52■□□□□ 0.242e-6■■■□□ 14.9
SRSF1Q07955 ADD1-213ENST00000508684 3059 ntTSL 215.95■□□□□ 0.142e-8■■■□□ 14.9
SRSF1Q07955 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.31□□□□□ -0.122e-6■■■□□ 14.9
SRSF1Q07955 GOLGA4-203ENST00000419177 760 ntTSL 314.28□□□□□ -0.123e-8■■■□□ 14.9
SRSF1Q07955 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.352e-8■■■□□ 14.9
SRSF1Q07955 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC12.78□□□□□ -0.362e-8■■■□□ 14.9
SRSF1Q07955 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.28□□□□□ -0.442e-8■■■□□ 14.9
SRSF1Q07955 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC11.35□□□□□ -0.592e-8■■■□□ 14.9
SRSF1Q07955 ADD1-219ENST00000514940 1332 ntTSL 511.32□□□□□ -0.62e-8■■■□□ 14.9
SRSF1Q07955 CHD2-217ENST00000629136 480 ntTSL 510.22□□□□□ -0.772e-8■■■□□ 14.9
SRSF1Q07955 ADD1-210ENST00000503455 3206 ntTSL 5 BASIC8.93□□□□□ -0.982e-8■■■□□ 14.9
SRSF1Q07955 ADD1-206ENST00000398129 3787 ntAPPRIS ALT1 TSL 2 BASIC8.6□□□□□ -1.032e-8■■■□□ 14.9
SRSF1Q07955 CHD2-206ENST00000625990 888 ntTSL 58.59□□□□□ -1.032e-8■■■□□ 14.9
SRSF1Q07955 ADD1-214ENST00000509039 1569 ntTSL 28.56□□□□□ -1.042e-8■■■□□ 14.9
SRSF1Q07955 ADD1-217ENST00000513328 3107 ntTSL 5 BASIC8.54□□□□□ -1.042e-8■■■□□ 14.9
SRSF1Q07955 ADD1-211ENST00000506157 5179 ntTSL 58.51□□□□□ -1.052e-8■■■□□ 14.9
SRSF1Q07955 GOLGA4-206ENST00000435830 4152 ntTSL 1 (best)7.8□□□□□ -1.163e-8■■■□□ 14.9
SRSF1Q07955 ADD1-209ENST00000503169 2394 ntTSL 26.74□□□□□ -1.332e-8■■■□□ 14.9
SRSF1Q07955 U2SURP-207ENST00000472373 1182 ntTSL 24.88□□□□□ -1.632e-8■■■□□ 14.9
SRSF1Q07955 U2SURP-209ENST00000480029 2855 ntTSL 22.68□□□□□ -1.982e-8■■■□□ 14.9
SRSF1Q07955 SARNP-201ENST00000336133 926 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.624e-6■■■□□ 14.9
SRSF1Q07955 SARNP-202ENST00000546604 1163 ntTSL 210.65□□□□□ -0.74e-6■■■□□ 14.9
SRSF1Q07955 SARNP-204ENST00000552207 2242 ntTSL 210.07□□□□□ -0.84e-6■■■□□ 14.9
SRSF1Q07955 SARNP-205ENST00000552884 997 ntTSL 1 (best)7.49□□□□□ -1.214e-6■■■□□ 14.9
SRSF1Q07955 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.334e-6■■■□□ 14.9
SRSF1Q07955 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.78□□□□□ -1.964e-6■■■□□ 14.9
SRSF1Q07955 KLC1-209ENST00000535194 710 ntTSL 319.06■□□□□ 0.649e-15■■■□□ 14.9
SRSF1Q07955 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.52■□□□□ 0.569e-15■■■□□ 14.9
SRSF1Q07955 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.03■□□□□ 0.489e-15■■■□□ 14.9
SRSF1Q07955 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.25■□□□□ 0.359e-15■■■□□ 14.9
SRSF1Q07955 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.359e-15■■■□□ 14.9
SRSF1Q07955 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.24■□□□□ 0.359e-15■■■□□ 14.9
SRSF1Q07955 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.97■□□□□ 0.319e-15■■■□□ 14.9
SRSF1Q07955 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.42■□□□□ 0.069e-15■■■□□ 14.9
SRSF1Q07955 KLC1-216ENST00000554228 2555 ntTSL 515.15■□□□□ 0.029e-15■■■□□ 14.9
SRSF1Q07955 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.1■□□□□ 0.019e-15■■■□□ 14.9
SRSF1Q07955 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.98□□□□□ -0.019e-15■■■□□ 14.9
SRSF1Q07955 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.199e-15■■■□□ 14.9
SRSF1Q07955 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.44□□□□□ -0.269e-15■■■□□ 14.9
SRSF1Q07955 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.21□□□□□ -0.299e-15■■■□□ 14.9
SRSF1Q07955 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC12.82□□□□□ -0.369e-15■■■□□ 14.9
SRSF1Q07955 KLC1-210ENST00000537046 875 ntTSL 312.66□□□□□ -0.389e-15■■■□□ 14.9
SRSF1Q07955 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.53□□□□□ -0.49e-15■■■□□ 14.9
SRSF1Q07955 KLC1-213ENST00000553325 976 ntTSL 210.5□□□□□ -0.739e-15■■■□□ 14.9
SRSF1Q07955 KLC1-220ENST00000555856 535 ntTSL 39.76□□□□□ -0.859e-15■■■□□ 14.9
SRSF1Q07955 KLC1-214ENST00000553436 630 ntTSL 29.74□□□□□ -0.859e-15■■■□□ 14.9
SRSF1Q07955 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC7.28□□□□□ -1.249e-15■■■□□ 14.9
SRSF1Q07955 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.47□□□□□ -1.699e-7■■■□□ 14.9
SRSF1Q07955 GTF2F1-204ENST00000594965 762 ntTSL 321■□□□□ 0.957e-7■■■□□ 14.9
SRSF1Q07955 GTF2F1-205ENST00000595047 1382 ntTSL 516.06■□□□□ 0.167e-7■■■□□ 14.9
SRSF1Q07955 GTF2F1-203ENST00000594213 1002 ntTSL 315.73■□□□□ 0.117e-7■■■□□ 14.9
SRSF1Q07955 GTF2F1-202ENST00000593678 1705 ntTSL 212.31□□□□□ -0.447e-7■■■□□ 14.9
SRSF1Q07955 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.767e-7■■■□□ 14.9
SRSF1Q07955 ZNF598-206ENST00000564824 2147 ntTSL 520.23■□□□□ 0.832e-12■■■□□ 14.9
SRSF1Q07955 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.572e-12■■■□□ 14.9
SRSF1Q07955 ZNF598-201ENST00000561787 786 ntTSL 316.63■□□□□ 0.252e-12■■■□□ 14.9
SRSF1Q07955 ZNF598-209ENST00000567625 775 ntTSL 515.64■□□□□ 0.092e-12■■■□□ 14.9
SRSF1Q07955 ZNF598-207ENST00000565396 4457 ntTSL 215.63■□□□□ 0.092e-12■■■□□ 14.9
SRSF1Q07955 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -02e-12■■■□□ 14.9
SRSF1Q07955 ZNF598-203ENST00000562988 3382 ntTSL 514.75□□□□□ -0.052e-12■■■□□ 14.9
SRSF1Q07955 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.062e-12■■■□□ 14.9
SRSF1Q07955 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.152e-12■■■□□ 14.9
SRSF1Q07955 ARHGAP26-214ENST00000469131 667 ntTSL 310.65□□□□□ -0.72e-12■■■□□ 14.9
SRSF1Q07955 ARHGAP26-212ENST00000461314 566 ntTSL 410.65□□□□□ -0.72e-12■■■□□ 14.9
SRSF1Q07955 ARHGAP26-215ENST00000469396 513 ntTSL 510.54□□□□□ -0.722e-12■■■□□ 14.9
SRSF1Q07955 ARHGAP26-211ENST00000451259 527 ntTSL 58.83□□□□□ -12e-12■■■□□ 14.9
SRSF1Q07955 SEPT9-222ENST00000589070 582 ntTSL 317.63■□□□□ 0.418e-12■■■□□ 14.9
SRSF1Q07955 SEPT9-240ENST00000591833 576 ntTSL 413.78□□□□□ -0.28e-12■■■□□ 14.9
SRSF1Q07955 ARHGAP27P1-BPTFP1-KPNA2P3-202ENST00000579125 1318 ntTSL 1 (best)20.53■□□□□ 0.881e-8■■■□□ 14.9
SRSF1Q07955 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC11.48□□□□□ -0.571e-8■■■□□ 14.9
SRSF1Q07955 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC10.42□□□□□ -0.741e-8■■■□□ 14.9
SRSF1Q07955 CCAR1-216ENST00000543706 869 ntTSL 56.35□□□□□ -1.391e-8■■■□□ 14.9
SRSF1Q07955 SON-203ENST00000381679 7860 ntTSL 5 BASIC11.21□□□□□ -0.626e-9■■■□□ 14.9
SRSF1Q07955 LDLR-201ENST00000252444 5337 ntAPPRIS ALT2 TSL 1 (best)10.82□□□□□ -0.683e-6■■■□□ 14.8
SRSF1Q07955 MSH5-214ENST00000468602 637 ntTSL 39.98□□□□□ -0.814e-6■■■□□ 14.8
SRSF1Q07955 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.431e-8■■■□□ 14.8
SRSF1Q07955 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC12.24□□□□□ -0.451e-8■■■□□ 14.8
Retrieved 100 of 14,836 protein–RNA pairs in 136.3 ms