RNA–Protein interactions for RNA: ENST00000543706.1

CCAR1-216, Transcript of cell division cycle and apoptosis regulator 1, humanhuman

TSL 5

Gene CCAR1, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAR1-216ENST00000543706 AEBP2Q6ZN18 517 aaPredicted RBP32.21■■■□□ 2.75
CCAR1-216ENST00000543706 CHIC1Q5VXU3 224 aa31.31■■■□□ 2.6
CCAR1-216ENST00000543706 PHF23Q9BUL5 403 aaPredicted RBP27.64■■■□□ 2.02
CCAR1-216ENST00000543706 SENP3Q9H4L4 574 aaPredicted RBP27.14■■□□□ 1.94
CCAR1-216ENST00000543706 PLPPR3Q6T4P5 718 aa25.34■■□□□ 1.65
CCAR1-216ENST00000543706 FOXD1Q16676 465 aa25.32■■□□□ 1.64
CCAR1-216ENST00000543706 PPP6R1Q9UPN7 881 aa24.41■■□□□ 1.5
CCAR1-216ENST00000543706 ADRA2BP18089 450 aa24.36■■□□□ 1.49
CCAR1-216ENST00000543706 PIAS4Q8N2W9 510 aaPredicted RBP23.82■■□□□ 1.4
CCAR1-216ENST00000543706 MSH5O43196 834 aa23.2■■□□□ 1.3
CCAR1-216ENST00000543706 PPP4R3CPQ6ZMV5 832 aa22.39■■□□□ 1.17
CCAR1-216ENST00000543706 MAPK8IP2Q13387 824 aaPredicted RBP22.13■■□□□ 1.13
CCAR1-216ENST00000543706 SCAF1Q9H7N4 1312 aaKnown RBP22.05■■□□□ 1.12
CCAR1-216ENST00000543706 KCNA4P22459 653 aa21.93■■□□□ 1.1
CCAR1-216ENST00000543706 CNKSR2Q8WXI2 1034 aa21.71■■□□□ 1.07
CCAR1-216ENST00000543706 DMRT2Q9Y5R5 561 aa21.71■■□□□ 1.07
CCAR1-216ENST00000543706 NCBP3Q53F19 620 aaKnown RBP21.66■■□□□ 1.06
CCAR1-216ENST00000543706 NPM3O75607 178 aaKnown RBP21.52■■□□□ 1.04
CCAR1-216ENST00000543706 POTEDQ86YR6 584 aa21.3■■□□□ 1
CCAR1-216ENST00000543706 RNF216Q9NWF9 866 aaPredicted RBP21.3■■□□□ 1
CCAR1-216ENST00000543706 HOXD11P31277 338 aaPredicted RBP21.26■□□□□ 0.99
CCAR1-216ENST00000543706 SLC4A1APQ9BWU0 796 aaKnown RBP20.79■□□□□ 0.92
CCAR1-216ENST00000543706 DNAJC5BQ9UF47 199 aa20.79■□□□□ 0.92
CCAR1-216ENST00000543706 DCAF8L1A6NGE4 600 aa20.77■□□□□ 0.92
CCAR1-216ENST00000543706 SLC4A2P04920 1241 aa20.37■□□□□ 0.85
CCAR1-216ENST00000543706 ZBTB22O15209 634 aa20.25■□□□□ 0.83
CCAR1-216ENST00000543706 EHMT2Q96KQ7 1210 aa20.25■□□□□ 0.83
CCAR1-216ENST00000543706 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.21■□□□□ 0.833e-7■■■■■ 29.6
CCAR1-216ENST00000543706 FOXD4L1Q9NU39 408 aa20.09■□□□□ 0.81
CCAR1-216ENST00000543706 CSRNP3Q8WYN3 585 aa20.04■□□□□ 0.8
CCAR1-216ENST00000543706 U3KPZ7 1027 aaPredicted RBP19.98■□□□□ 0.79
CCAR1-216ENST00000543706 RNF39Q9H2S5 420 aa19.97■□□□□ 0.79
CCAR1-216ENST00000543706 MYCNP04198 464 aaPredicted RBP19.79■□□□□ 0.76
CCAR1-216ENST00000543706 C1QBPQ07021 282 aaKnown RBP19.64■□□□□ 0.73
CCAR1-216ENST00000543706 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.51■□□□□ 0.71
CCAR1-216ENST00000543706 HNRNPUL2Q1KMD3 747 aaKnown RBP19.51■□□□□ 0.71
CCAR1-216ENST00000543706 SAMD1Q6SPF0 538 aaPredicted RBP19.49■□□□□ 0.71
CCAR1-216ENST00000543706 SPINK5Q9NQ38 1064 aaPredicted RBP19.47■□□□□ 0.71
CCAR1-216ENST00000543706 ATF5Q9Y2D1 282 aaPredicted RBP19.44■□□□□ 0.7
CCAR1-216ENST00000543706 CACNB1Q02641 598 aaPredicted RBP19.42■□□□□ 0.7
CCAR1-216ENST00000543706 ATXN8OSP0DMR3 200 aa19.31■□□□□ 0.68
CCAR1-216ENST00000543706 CAPN15O75808 1086 aa19.29■□□□□ 0.68
CCAR1-216ENST00000543706 APLP2Q06481 763 aa19.27■□□□□ 0.68
CCAR1-216ENST00000543706 TRHP20396 242 aaPredicted RBP19.21■□□□□ 0.67
CCAR1-216ENST00000543706 ZNF219Q9P2Y4 722 aaPredicted RBP19.12■□□□□ 0.65
CCAR1-216ENST00000543706 DSG3P32926 999 aa19.01■□□□□ 0.63
CCAR1-216ENST00000543706 ABCB7O75027 752 aa19■□□□□ 0.63
CCAR1-216ENST00000543706 POLA2Q14181 598 aa18.9■□□□□ 0.62
CCAR1-216ENST00000543706 MKRN4PQ13434 485 aaPredicted RBP18.57■□□□□ 0.56
CCAR1-216ENST00000543706 ZBTB12Q9Y330 459 aaPredicted RBP18.43■□□□□ 0.54
CCAR1-216ENST00000543706 FBLN2P98095 1184 aa18.4■□□□□ 0.54
CCAR1-216ENST00000543706 OSCARQ8IYS5 282 aa18.31■□□□□ 0.52
CCAR1-216ENST00000543706 FKBP8Q14318 412 aa18.07■□□□□ 0.48
CCAR1-216ENST00000543706 SPDYE4A6NLX3 237 aa18.03■□□□□ 0.48
CCAR1-216ENST00000543706 SPDYE2BA6NHP3 402 aa18.01■□□□□ 0.47
CCAR1-216ENST00000543706 SPDYE6P0CI01 402 aa18.01■□□□□ 0.47
CCAR1-216ENST00000543706 SPDYE2Q495Y8 402 aa18.01■□□□□ 0.47
CCAR1-216ENST00000543706 RBM42Q9BTD8 480 aaKnown RBP17.97■□□□□ 0.47
CCAR1-216ENST00000543706 ZNF692Q9BU19 519 aaPredicted RBP17.97■□□□□ 0.47
CCAR1-216ENST00000543706 SSUH2Q9Y2M2 353 aa17.94■□□□□ 0.46
CCAR1-216ENST00000543706 AKT1S1Q96B36 256 aa17.79■□□□□ 0.44
CCAR1-216ENST00000543706 PABPN1Q86U42 306 aaKnown RBP eCLIP17.77■□□□□ 0.44
CCAR1-216ENST00000543706 PROM2Q8N271 834 aa17.77■□□□□ 0.44
CCAR1-216ENST00000543706 REM2Q8IYK8 340 aaPredicted RBP17.7■□□□□ 0.42
CCAR1-216ENST00000543706 PITPNM1O00562 1244 aa17.53■□□□□ 0.4
CCAR1-216ENST00000543706 SPDYE1Q8NFV5 336 aaPredicted RBP17.47■□□□□ 0.39
CCAR1-216ENST00000543706 CLEC11AQ9Y240 323 aa17.46■□□□□ 0.39
CCAR1-216ENST00000543706 CHRDL2Q6WN34 429 aa17.34■□□□□ 0.37
CCAR1-216ENST00000543706 STAG3Q9UJ98 1225 aa17.33■□□□□ 0.36
CCAR1-216ENST00000543706 FBXO3Q9UK99 471 aa17.28■□□□□ 0.36
CCAR1-216ENST00000543706 PRR29P0C7W0 189 aa17.25■□□□□ 0.35
CCAR1-216ENST00000543706 VASPP50552 380 aaPredicted RBP17.17■□□□□ 0.34
CCAR1-216ENST00000543706 FXR2P51116 673 aaKnown RBP eCLIP17.16■□□□□ 0.342e-8■■■□□ 17.5
CCAR1-216ENST00000543706 PIP4P2Q8N4L2 257 aa17.15■□□□□ 0.34
CCAR1-216ENST00000543706 CHADLQ6NUI6 762 aa17.13■□□□□ 0.33
CCAR1-216ENST00000543706 CREBZFQ9NS37 354 aa17.13■□□□□ 0.33
CCAR1-216ENST00000543706 MIER1Q8N108 512 aa17.07■□□□□ 0.32
CCAR1-216ENST00000543706 PRKAR2AP13861 404 aaKnown RBP17.05■□□□□ 0.32
CCAR1-216ENST00000543706 PLCD3Q8N3E9 789 aa17.03■□□□□ 0.32
CCAR1-216ENST00000543706 IFNLR1Q8IU57 520 aaPredicted RBP17■□□□□ 0.31
CCAR1-216ENST00000543706 MNX1P50219 401 aaPredicted RBP16.99■□□□□ 0.31
CCAR1-216ENST00000543706 FARP1Q9Y4F1 1045 aaPredicted RBP16.88■□□□□ 0.29
CCAR1-216ENST00000543706 PLEKHG5O94827 1062 aa16.84■□□□□ 0.29
CCAR1-216ENST00000543706 POTEHQ6S545 545 aa16.83■□□□□ 0.28
CCAR1-216ENST00000543706 KLHL34Q8N239 644 aa16.82■□□□□ 0.28
CCAR1-216ENST00000543706 ZBTB47Q9UFB7 747 aaPredicted RBP16.75■□□□□ 0.27
CCAR1-216ENST00000543706 NUBP1P53384 320 aa16.71■□□□□ 0.27
CCAR1-216ENST00000543706 SPOCK2Q92563 424 aa16.69■□□□□ 0.26
CCAR1-216ENST00000543706 NPM1P06748 294 aaKnown RBP eCLIP16.68■□□□□ 0.26
CCAR1-216ENST00000543706 RASEFQ8IZ41 740 aa16.68■□□□□ 0.26
CCAR1-216ENST00000543706 C19orf67A6NJJ6 358 aa16.58■□□□□ 0.24
CCAR1-216ENST00000543706 EVX2Q03828 476 aa16.57■□□□□ 0.24
CCAR1-216ENST00000543706 HAX1O00165 279 aa16.55■□□□□ 0.24
CCAR1-216ENST00000543706 CD44P16070 742 aaKnown RBP16.55■□□□□ 0.24
CCAR1-216ENST00000543706 TSPYL2Q9H2G4 693 aaPredicted RBP16.54■□□□□ 0.24
CCAR1-216ENST00000543706 FAM212AQ96EL1 285 aa16.48■□□□□ 0.23
CCAR1-216ENST00000543706 DCAF8Q5TAQ9 597 aa16.47■□□□□ 0.23
CCAR1-216ENST00000543706 CIZ1Q9ULV3 898 aaPredicted RBP16.47■□□□□ 0.23
CCAR1-216ENST00000543706 ZRANB1Q9UGI0 708 aa16.46■□□□□ 0.23
CCAR1-216ENST00000543706 RTN4Q9NQC3 1192 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms