Protein–RNA interactions for Protein: P40070

LSM4, U6 snRNA-associated Sm-like protein LSm4, yeastyeast

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM4P40070 YOR343W-AYOR343W-A 1317 nt1.36□□□□□ -2.19
LSM4P40070 TBS1YBR150C 3285 nt1.35□□□□□ -2.19
LSM4P40070 PRM8YGL053W 714 nt1.35□□□□□ -2.19
LSM4P40070 tQ(UUG)E2tQ(UUG)E2 72 nt1.35□□□□□ -2.19
LSM4P40070 SPO13YHR014W 876 nt1.35□□□□□ -2.19
LSM4P40070 GIC1YHR061C 945 nt1.35□□□□□ -2.19
LSM4P40070 NOP10YHR072W-A 177 nt1.35□□□□□ -2.19
LSM4P40070 HYR1YIR037W 492 nt1.35□□□□□ -2.19
LSM4P40070 PEP8YJL053W 1140 nt1.35□□□□□ -2.19
LSM4P40070 AFB1YLR040C 675 nt1.35□□□□□ -2.19
LSM4P40070 TRX1YLR043C 312 nt1.35□□□□□ -2.19
LSM4P40070 BER1YLR412W 825 nt1.35□□□□□ -2.19
LSM4P40070 YPL080CYPL080C 327 nt1.35□□□□□ -2.19
LSM4P40070 RPB5YBR154C 648 nt1.35□□□□□ -2.19
LSM4P40070 STB4YMR019W 2850 nt1.35□□□□□ -2.19
LSM4P40070 HKR1YDR420W 5409 nt1.34□□□□□ -2.19
LSM4P40070 MSH6YDR097C 3729 nt1.34□□□□□ -2.19
LSM4P40070 CHS1YNL192W 3396 nt1.34□□□□□ -2.19
LSM4P40070 YDL041WYDL041W 354 nt1.34□□□□□ -2.19
LSM4P40070 RTT102YGR275W 474 nt1.34□□□□□ -2.19
LSM4P40070 LOA1YPR139C 903 nt1.34□□□□□ -2.19
LSM4P40070 FAB1YFR019W 6837 nt1.34□□□□□ -2.2
LSM4P40070 NAN1YPL126W 2691 nt1.34□□□□□ -2.2
LSM4P40070 RPH1YER169W 2391 nt1.34□□□□□ -2.2
LSM4P40070 SEC63YOR254C 1992 nt1.34□□□□□ -2.2
LSM4P40070 DPB11YJL090C 2295 nt1.33□□□□□ -2.2
LSM4P40070 PIK1YNL267W 3201 nt1.33□□□□□ -2.2
LSM4P40070 SXM1YDR395W 2835 nt1.33□□□□□ -2.2
LSM4P40070 TPM2YIL138C 486 nt1.33□□□□□ -2.2
LSM4P40070 RPL40AYIL148W 387 nt1.33□□□□□ -2.2
LSM4P40070 IST3YIR005W 447 nt1.33□□□□□ -2.2
LSM4P40070 CMS1YLR003C 876 nt1.33□□□□□ -2.2
LSM4P40070 YNL146C-AYNL146C-A 195 nt1.33□□□□□ -2.2
LSM4P40070 SPR3YGR059W 1539 nt1.33□□□□□ -2.2
LSM4P40070 NCL1YBL024W 2055 nt1.33□□□□□ -2.2
LSM4P40070 YGR109W-BYGR109W-B 4644 nt1.32□□□□□ -2.2
LSM4P40070 MET32YDR253C 576 nt1.32□□□□□ -2.2
LSM4P40070 ATP17YDR377W 306 nt1.32□□□□□ -2.2
LSM4P40070 TIM10YHR005C-A 282 nt1.32□□□□□ -2.2
LSM4P40070 CIC1YHR052W 1131 nt1.32□□□□□ -2.2
LSM4P40070 YIL030W-AYIL030W-A 339 nt1.32□□□□□ -2.2
LSM4P40070 RAM2YKL019W 951 nt1.32□□□□□ -2.2
LSM4P40070 YKL044WYKL044W 321 nt1.32□□□□□ -2.2
LSM4P40070 YLR458WYLR458W 381 nt1.32□□□□□ -2.2
LSM4P40070 PHO80YOL001W 882 nt1.32□□□□□ -2.2
LSM4P40070 RPB11YOL005C 363 nt1.32□□□□□ -2.2
LSM4P40070 TRS20YBR254C 528 nt1.32□□□□□ -2.2
LSM4P40070 PHR1YOR386W 1698 nt1.32□□□□□ -2.2
LSM4P40070 SNU56YDR240C 1479 nt1.31□□□□□ -2.2
LSM4P40070 YGR130CYGR130C 2451 nt1.31□□□□□ -2.2
LSM4P40070 MDM32YOR147W 1869 nt1.31□□□□□ -2.2
LSM4P40070 HNT1YDL125C 477 nt1.31□□□□□ -2.2
LSM4P40070 APQ13YJL075C 417 nt1.31□□□□□ -2.2
LSM4P40070 SEN15YMR059W 387 nt1.31□□□□□ -2.2
LSM4P40070 URA10YMR271C 684 nt1.31□□□□□ -2.2
LSM4P40070 YOR032W-AYOR032W-A 201 nt1.31□□□□□ -2.2
LSM4P40070 Q0017Q0017 162 nt1.31□□□□□ -2.2
LSM4P40070 MGR1YCL044C 1254 nt1.31□□□□□ -2.2
LSM4P40070 BFA1YJR053W 1725 nt1.31□□□□□ -2.2
LSM4P40070 BRO1YPL084W 2535 nt1.31□□□□□ -2.2
LSM4P40070 CRM1YGR218W 3255 nt1.3□□□□□ -2.2
LSM4P40070 MEC1YBR136W 7107 nt1.3□□□□□ -2.2
LSM4P40070 KCS1YDR017C 3153 nt1.3□□□□□ -2.2
LSM4P40070 YDR220CYDR220C 294 nt1.3□□□□□ -2.2
LSM4P40070 RNR4YGR180C 1038 nt1.3□□□□□ -2.2
LSM4P40070 LSM7YNL147W 348 nt1.3□□□□□ -2.2
LSM4P40070 YOR105WYOR105W 327 nt1.3□□□□□ -2.2
LSM4P40070 SPC29YPL124W 762 nt1.3□□□□□ -2.2
LSM4P40070 ATP15YPL271W 189 nt1.3□□□□□ -2.2
LSM4P40070 YPR177CYPR177C 372 nt1.3□□□□□ -2.2
LSM4P40070 SPO22YIL073C 2928 nt1.3□□□□□ -2.2
LSM4P40070 CFT1YDR301W 4074 nt1.29□□□□□ -2.2
LSM4P40070 YDL025W-AYDL025W-A 105 nt1.29□□□□□ -2.2
LSM4P40070 YER121WYER121W 345 nt1.29□□□□□ -2.2
LSM4P40070 SPC1YJR010C-A 285 nt1.29□□□□□ -2.2
LSM4P40070 RPS7BYNL096C 573 nt1.29□□□□□ -2.2
LSM4P40070 YOR029WYOR029W 336 nt1.29□□□□□ -2.2
LSM4P40070 SVS1YPL163C 783 nt1.29□□□□□ -2.2
LSM4P40070 APL2YKL135C 2181 nt1.29□□□□□ -2.2
LSM4P40070 TTI1YKL033W 3117 nt1.29□□□□□ -2.2
LSM4P40070 UTP13YLR222C 2454 nt1.29□□□□□ -2.2
LSM4P40070 PBY1YBR094W 2262 nt1.28□□□□□ -2.2
LSM4P40070 VMR1YHL035C 4779 nt1.28□□□□□ -2.2
LSM4P40070 RTR2YDR066C 591 nt1.28□□□□□ -2.2
LSM4P40070 PHS1YJL097W 654 nt1.28□□□□□ -2.2
LSM4P40070 YJL127C-BYJL127C-B 159 nt1.28□□□□□ -2.2
LSM4P40070 EAF6YJR082C 342 nt1.28□□□□□ -2.2
LSM4P40070 TIM8YJR135W-A 264 nt1.28□□□□□ -2.2
LSM4P40070 RPL37AYLR185W 267 nt1.28□□□□□ -2.2
LSM4P40070 YPL197CYPL197C 414 nt1.28□□□□□ -2.2
LSM4P40070 SKI3YPR189W 4299 nt1.28□□□□□ -2.2
LSM4P40070 HIR3YJR140C 4947 nt1.27□□□□□ -2.21
LSM4P40070 RPL9AYGL147C 576 nt1.27□□□□□ -2.21
LSM4P40070 SMD1YGR074W 441 nt1.27□□□□□ -2.21
LSM4P40070 CYB5YNL111C 363 nt1.27□□□□□ -2.21
LSM4P40070 YOL013W-BYOL013W-B 291 nt1.27□□□□□ -2.21
LSM4P40070 IRC16YPR038W 360 nt1.27□□□□□ -2.21
LSM4P40070 MDM20YOL076W 2391 nt1.27□□□□□ -2.21
LSM4P40070 YHR214C-CYHR214C-C 1437 nt1.26□□□□□ -2.21
LSM4P40070 SPE1YKL184W 1401 nt1.26□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 26.5 ms